Bacteroides pectinophilus: NQ488_13400
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Entry
NQ488_13400 CDS
T09080
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bpen
Bacteroides pectinophilus
Brite
KEGG Orthology (KO) [BR:
bpen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpen03400
]
NQ488_13400
DNA repair and recombination proteins [BR:
bpen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NQ488_13400
Archaeal homologous recombinant proteins
NQ488_13400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
AAA_16
nSTAND3
ABC_tran
AAA_22
NTPase_1
AAA_21
HP0268
Motif
Other DBs
NCBI-ProteinID:
UWN95522
LinkDB
All DBs
Position
complement(2812003..2815137)
Genome browser
AA seq
1044 aa
AA seq
DB search
MRPIRLTMSAFGSYADRVTIEFDRGREGLFLITGDTGSGKTTIFDAIMYALYDETSGGNR
SGNMMRSQYADADTDTWVEFTFEYGNNIYSVRRNPEYIRQSKRRNADGSARYTTEKPDVT
LTMPDGSEFTGNKKEVNGKIVEIIGLDAKQFAQVAMIAQGDFMKLLYADSDDRREIFSRI
FRTEDYQRIQYELQARYKNIYGQLEDNRKIYDSRIGQIKVTEAYNERYRQLCERKEPDYE
ESLTLLGDIIASQQSLYDSLNAEKDELTGQRDNNNAAIGRAKQTNSLFDEYDKAAAETLD
IEQRRPQADGMRRELEAAKRAAAVAVLDDKRTDAEEKLRQSEKRVKELATWIDEAAKRLD
RQSAELSGISAVYNDECPKLRLQAEEIRKSIPDYDTFGSRKKEFDALNNRKKDLNNQKAA
LEEELSRQKAYQDGITAFQNGNADCMVRLEKVNNTISDKKDTLDRIRKIEDLQEQLLKMR
KRHEQKSSEYLNARNEYEHASACYERLEALFMSGQAGILARQLEDGMPCPVCGSVIHPNP
AAFNNEDVTQASVDEARRSRDKADAARQNMYTETVIAKSECDNQIKLIEQSIQSVMGDDG
QDEDITGLKLKTEKELTDVGEEMRKLNETARIYRDNEDKLKKLTSDLSDMSVRVDSLKNE
ISQDEVQLAHMESEISALSKNLRYSDRSEAEKIMKELEDRIAAVEKSWLSRQELVANLQK
ELAGKRGEADNEQKGAEKLRETYEAACRALADSVESEGFASEAEYKEAKRDKVAMAVLEA
GIAEYDREVADNAVKIKTLAAQIDGKMRVDTQEAEAAVVRIEKLIREKSGHMGELYADIR
ANQEIADEFAKMSEERAGAMHKYRIYATLYNTANGSLTGSVKINFETFVLRQYFKKIISA
ANRRLSAMNDGQWCLMCRDIDNIDNKGRKSGLDIDVHDELTNSVRDVKTLSGGETFMAAL
AMALGMSDIIQNRTGAVRLDTMFIDEGFGSLDDYSRQQAINILKGLADGRRMIGIISHVT
ELKEQIECQLVVSKTGRGSSVKWR
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaataagacttacaatgtcagcattcggctcgtatgcggacagggtgacaatt
gaatttgacaggggaagagaaggacttttcctgattacgggtgacactggctcaggcaag
acgactatttttgatgcaatcatgtatgcactctacgatgagacgagtggcggcaacaga
agcggtaatatgatgcgcagccagtatgcggatgcagatacggatacatgggtagaattt
acgtttgagtatgggaacaacatatattcagtaaggcgtaaccctgagtacatacgtcag
agtaagcgccgcaatgcggacggctcggccagatatacaacggagaagccggatgttaca
cttacaatgcctgacggaagtgaatttaccggtaataagaaagaggttaacggtaagatt
gttgagataatcgggctggatgcaaagcagtttgcgcaggtggcaatgattgcgcagggt
gatttcatgaagcttttgtatgcggattctgatgacagaagagagatattctccaggata
ttcaggacggaggattatcagaggattcaatatgagcttcaggccagatataagaatata
tacggccagcttgaggataaccggaagatatatgattcacggattggacagattaaagta
acggaagcttataatgagagataccggcagctttgtgagagaaaagaaccggattacgag
gagtctctgacgctgcttggcgatataattgcatcacagcagtcattatacgacagcctg
aatgctgagaaggacgagcttacgggacagagagataataataatgcagctatcgggaga
gcgaagcagactaacagcctgtttgatgaatatgataaagctgcggcggagactttggat
attgagcagagaagacctcaggcagatggcatgagacgtgagcttgaagcagcaaagcgt
gcagcggcagtggctgtattggatgataagagaacagatgcagaagagaagctgagacag
tctgagaagcgggtgaaggaacttgccacatggattgatgaagctgcaaaaaggcttgac
aggcagagtgcggagctttccggcataagtgcagtatataatgacgaatgtcctaagctc
aggctgcaggctgaggagattagaaaaagcattccggattatgacacatttggcagcagg
aagaaggaatttgatgctcttaataataggaagaaagaccttaacaatcagaaagcagca
ttagaagaggaattaagcaggcaaaaggcatatcaggacggtataacagcatttcagaac
gggaacgctgactgtatggtaaggctcgaaaaggttaataacacaataagcgacaaaaag
gatactcttgacagaatcaggaagattgaagatttgcaggagcagcttttaaagatgcgc
aagaggcatgaacagaaaagcagtgagtaccttaatgcacggaatgaatatgaacatgcc
agtgcgtgctatgagaggcttgaagcattattcatgagcggacaggcgggaatacttgca
aggcagcttgaagacggaatgccgtgcccggtatgtggttctgtaattcacccaaatccg
gcggcttttaataatgaagatgtaacgcaggcatcggttgatgaagcaagaaggtcaaga
gacaaggcagatgctgcaaggcagaatatgtatacagaaacagtcattgccaaaagtgaa
tgtgataatcagattaagcttatcgaacagagcattcaaagtgttatgggagatgatggg
caggatgaagatattaccggactcaagcttaagacagaaaaagaactcactgatgtcggt
gaagagatgcgtaagcttaacgagacagcacgcatttacagagacaatgaggataagctt
aagaagcttacatcagaccttagtgatatgagtgtcagggttgattcactaaagaatgag
atatcgcaggatgaggtacagcttgcacacatggagtcagagatatcggcactgtccaag
aacctgagatattcagaccgttcggaagccgagaagattatgaaagagcttgaagacagg
atagcggcagttgagaagtcctggctcagccggcaggagcttgtggcgaatcttcaaaaa
gagcttgcaggaaaacgtggagaagcggataatgaacagaaaggggcggagaagttaagg
gaaacttatgaagctgcatgcagagcattggcagactcggttgaatctgaaggatttgcc
tctgaagccgaatataaagaagcaaagcgggataaggtagcaatggcggtgcttgaggcc
gggattgccgaatatgacagggaagtagccgataatgctgtaaagattaagacgctggcc
gcccagattgacggaaagatgcgtgttgatacgcaggaggctgaggcggcagtcgtacga
attgagaagcttatccgcgaaaaatcaggtcatatgggtgaactctatgcggatataagg
gctaatcaggagatagctgatgagtttgcaaagatgtcagaagaacgcgcgggcgcaatg
cataagtacaggatatatgcaacgctttacaatacggcgaacggaagtcttacaggcagc
gtcaagattaattttgagacatttgtattaagacagtatttcaaaaagataataagtgca
gccaacaggaggctgtcggcaatgaatgacgggcagtggtgccttatgtgccgtgacatt
gataatatagacaataagggcagaaagtcggggcttgatatagatgtccatgatgaactt
actaattcagtgagggatgttaagacactgtcaggcggagagacatttatggcagcgctt
gcaatggcgctcggaatgtctgatataatacagaacaggacaggggcagtgcgccttgat
acaatgtttattgatgagggcttcggttcacttgatgattattcaaggcaacaggcgatt
aatatactaaaaggtcttgcggacggcagacgtatgattggaattatatcgcatgttacg
gaactgaaggagcagatagaatgtcagcttgtggtaagcaagacaggaaggggaagcagt
gtgaagtggaggtag
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