Bacteroides pectinophilus: NQ488_13405
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Entry
NQ488_13405 CDS
T09080
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
bpen
Bacteroides pectinophilus
Brite
KEGG Orthology (KO) [BR:
bpen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpen03400
]
NQ488_13405
DNA repair and recombination proteins [BR:
bpen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NQ488_13405
Archaeal homologous recombinant proteins
NQ488_13405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
DUF3369
DUF4924
Motif
Other DBs
NCBI-ProteinID:
UWN95523
LinkDB
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Position
complement(2815151..2816332)
Genome browser
AA seq
393 aa
AA seq
DB search
MRFFHMSDLHIGKQLHERSLLDDQRHVLTRVVEYVREYSPDAVIIAGDVYDKSLPSAEAV
TVFDDFIVNLADTGTTVMLISGNHDSAERLNYGSRIFTKSNIHVAGMPPRNSGDHLKSVV
LKDEYGEVTFWLMPFIKPGYVKGVFADENAVGASTDAVGDCCSSYDSAVHAVIARENIDY
SERNVIVSHQFYTNGQTQPSRTDSETISVGGIDNVDVSAVKDFDYAALGHIHRGQKVGYD
YVRYCGTMLKYSVSEREDNKALLMVDMKEKGKPAEITELKLDALHDVRLIKGKFDEIVRQ
YSDKNTNDYVSVVLTDENEVYNARQTLIDIFPNLLSVSVDNSRTNREYVEEYDDVNVSLD
ELFAEFFRRMQGRDMSDDERRAMEDVINISCRQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagattttttcatatgtcggaccttcatatcggcaagcagcttcatgagagaagtctg
cttgatgaccagaggcatgtacttacacgcgttgtggagtatgtacgtgagtacagcccc
gatgcagttataattgcaggtgatgtatatgataagtcacttccgtcagccgaagcggtt
acagtgtttgatgattttattgttaatcttgcggatacgggcactacagttatgcttata
agcggcaatcatgattcggcagagaggcttaactatggcagcagaatcttcacaaaatcc
aacatccacgtggcaggaatgcctccgcgcaacagtggggaccatcttaagagtgtggtg
cttaaggatgaatatggggaagtcactttctggctgatgccatttattaagccgggttat
gtcaagggcgtatttgcagacgagaatgcagttggggcttctacagacgcagttggggat
tgctgcagttcttatgacagtgcagttcatgcagttatagcaagggagaatattgactat
tcagaacgtaatgttatcgtgtcacatcaattctatactaatggacagacgcagccgtca
agaactgattctgagactataagtgtaggcggaattgataatgttgatgtcagtgccgtt
aaggattttgactatgctgcgcttggccatatacacagaggacagaaggtcggatatgat
tatgtaaggtattgcggaacaatgcttaagtattcagtaagtgaacgtgaagataataag
gcacttcttatggtagatatgaaagagaagggcaaaccggctgagataacggagcttaag
cttgatgcgctgcatgatgtaagactgataaagggaaagtttgatgagatagtaaggcaa
tattccgataagaatacgaatgactacgtcagtgttgtgctgactgatgagaatgaggtt
tataatgcacgtcagactcttattgatatatttccgaatctgttatctgtgagtgtggac
aattcaaggacgaacagggagtacgtggaagagtatgatgatgtgaatgtatctttggat
gaactgtttgcagaattcttccgcaggatgcagggaagagatatgtcagatgatgagcgc
agggcaatggaagatgtaattaatatatcatgccggcaatga
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