KEGG   Bordetella pertussis 18323: BN118_1565
Entry
BN118_1565        CDS       T02296                                 
Symbol
fecI
Name
(GenBank) ECF-family sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bper  Bordetella pertussis 18323
Pathway
bper02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bper00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BN118_1565 (fecI)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bper03021]
    BN118_1565 (fecI)
Transcription machinery [BR:bper03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BN118_1565 (fecI)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 PhyR_sigma-like HsdM_C OpcA_G6PD_C HTH_24 GerE HTH_28
Other DBs
NCBI-ProteinID: CCJ62990
UniProt: A0A0T7CN59
LinkDB
Position
1716381..1716914
AA seq 177 aa
MPASLITSPSARPAADTAAVEGLYRQHRSWLAGWLRRRLGCPHRAEDLTQDVFVRVIQGR
KAVRMEQARALLATIAKGLVIDHQRRAALEHAYLEYLAAQPSGHAPSPQQQAELLQALVE
LDRLLEGLPPRARAVFLMSQLEGLGYAEIAQRLRISLSSVQQYMLRAMSACYMAFHE
NT seq 534 nt   +upstreamnt  +downstreamnt
gtgcctgccagcctgatcacttcgccctccgcccgtcccgccgccgacaccgccgcggtg
gagggcctgtaccgccagcaccggtcgtggctggccgggtggctgcggcggcggctgggc
tgtccgcaccgcgccgaggatctgacgcaggatgtgttcgtgcgcgtgatccaggggcgc
aaggcggtacgcatggagcaggcgcgcgccttgctggccaccatcgccaagggactggtc
atcgatcaccagcgccgtgcggcgctggagcacgcttatctggaatacctggcggcgcag
ccgtcggggcacgcgccttcgccgcaacagcaggccgagctgctgcaggcgctggtcgag
ctcgatcgcctgctcgaaggcttgccgccgcgcgcccgcgcggtgttcctgatgtcgcag
ctcgaagggctgggctatgccgagatcgcgcaacgcctgcgcatttcgctcagttcggtg
cagcaatacatgctgcgcgccatgagcgcttgttacatggcattccatgagtag

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