Bordetella pertussis 18323: BN118_1565
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Entry
BN118_1565 CDS
T02296
Symbol
fecI
Name
(GenBank) ECF-family sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bper
Bordetella pertussis 18323
Pathway
bper02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bper00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BN118_1565 (fecI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bper03021
]
BN118_1565 (fecI)
Transcription machinery [BR:
bper03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN118_1565 (fecI)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
PhyR_sigma-like
HsdM_C
OpcA_G6PD_C
HTH_24
GerE
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CCJ62990
UniProt:
A0A0T7CN59
LinkDB
All DBs
Position
1716381..1716914
Genome browser
AA seq
177 aa
AA seq
DB search
MPASLITSPSARPAADTAAVEGLYRQHRSWLAGWLRRRLGCPHRAEDLTQDVFVRVIQGR
KAVRMEQARALLATIAKGLVIDHQRRAALEHAYLEYLAAQPSGHAPSPQQQAELLQALVE
LDRLLEGLPPRARAVFLMSQLEGLGYAEIAQRLRISLSSVQQYMLRAMSACYMAFHE
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgccagcctgatcacttcgccctccgcccgtcccgccgccgacaccgccgcggtg
gagggcctgtaccgccagcaccggtcgtggctggccgggtggctgcggcggcggctgggc
tgtccgcaccgcgccgaggatctgacgcaggatgtgttcgtgcgcgtgatccaggggcgc
aaggcggtacgcatggagcaggcgcgcgccttgctggccaccatcgccaagggactggtc
atcgatcaccagcgccgtgcggcgctggagcacgcttatctggaatacctggcggcgcag
ccgtcggggcacgcgccttcgccgcaacagcaggccgagctgctgcaggcgctggtcgag
ctcgatcgcctgctcgaaggcttgccgccgcgcgcccgcgcggtgttcctgatgtcgcag
ctcgaagggctgggctatgccgagatcgcgcaacgcctgcgcatttcgctcagttcggtg
cagcaatacatgctgcgcgccatgagcgcttgttacatggcattccatgagtag
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integrated database retrieval system