Bordetella pertussis 18323: BN118_2259
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Entry
BN118_2259 CDS
T02296
Name
(GenBank) putative ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
bper
Bordetella pertussis 18323
Brite
KEGG Orthology (KO) [BR:
bper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bper03019
]
BN118_2259
Enzymes [BR:
bper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BN118_2259
Messenger RNA biogenesis [BR:
bper03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BN118_2259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
T2SSE
AAA_22
NACHT
nSTAND3
AAA_25
TsaE
PhoH
Motif
Other DBs
NCBI-ProteinID:
CCJ63684
UniProt:
A0A0T7CQ76
LinkDB
All DBs
Position
complement(2455201..2459085)
Genome browser
AA seq
1294 aa
AA seq
DB search
MPEASRPPERAAAARSEPRPERPIPAISYPEDLPVSARRQEIARAIAAHQVVIVSGETGS
GKTTQLPKICLELGRGRRKMIGHTQPRRLAATSVAKRIAEELRTPMGEVVGYQVRFNDRT
GPNASIKLMTDGILLAESQRDPLLRRYDTIIIDETHERSLNIDFLLGYLKQLLPRRPDLK
VIITSATIDAERFARHFAAGPERPAPVIEVSGRLYPVEVRYRPVQPPMSDEAAAAPAKGG
RERSAGDEERDLIDAIVDAVDECARHGPGDVLVFLPGEREIRESAEALRKRHPVGTEVLP
LYARLSQAEQEQIFHPRGNARRVVLATNVAETSLTVPGIRFVVDSGLARVKRYSWRNKVE
QLRIEPVSRASANQRAGRCGRIGPGLCIRLYDETDFNARAPFTDPEVLRSSLASVILRMK
SLKLDDIEQFPFVEAPPGRAVADGYHLLQELGAIELAGDGEAAEAGGGGAAFRLTRTGQE
LAKLPVDPRIGRMILAAREQQCLAEMLIIAAALSVQDPRDRPMAEREAAESAHAKFADDK
SEFLSFLKLWRWYGEQVQHKASQRKLVALLRQNFLSPVRLREWHDVHTQLAALVGEQGWR
LNQSEATYEQLHMALLSGLLGNIGFKGEEGGQYHGAREIRFHIHPGSRLVKKAGRWIVAA
ELVETTRLYARCVARIEPVWLERAAAHLLRRNWSDPRWEKKAGQVVANERATLYGLLVYN
GRRVHYGRINPQHARELFIRQTLVPGEIDTRLPFVAHNRKLIAGIEKLEHQTRRPDILVD
DELIYAFYDRQLPADISQAASLEKWVNGLDKAAAARLLLTRDELMRHEAAGVTTDVFPKK
VEWQGVAMPLDYHFEPGSPRDGVTLSVPLFALNQLDAQRCEWLVPGMLKEKAHLLLKSLP
QKLRRHCVPLPDYAAGFYERWYERQADPQQGLVDALIADMWDQVQVRPAPGDFKLETLPA
HLFMNFKVVDEHGRMLAAGRNLAQLKAELGKQAQATFQQLAARDSDVAQALAHENLTSWS
FGPLPEIMEIKRGGQSVIGYPALVDRGAHCDLDVFDDPDEARRHHRAGLLRLFRLALREQ
VKFLEKNLADLTKMSMLYMALGTQEELRDQIIDCALAQACLAEPWPVNEQQFEARRQEGK
GRLGLLAQEVARMAHAILAEYGALQRKLPQARPHAAAYADLQQQLGVLMPKWFVRDTPYA
QLAHYPRYLKAAVARIDKLRADPARDARLMGEMAPILTQYQRARSALKGAPDPRLDEFRW
LLEELRVALFAQELRTPMPVSVKRLMKAWESLRR
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagcctcccgtccgcccgagcgcgcggccgccgcgcgctccgagccgcgcccc
gagcggcccatccccgcgatttcctatcccgaagacctgccggtcagcgcgcggcgccag
gaaatcgcgcgcgccatcgccgcccaccaggtggtcatcgtcagcggcgagacggggtcg
ggcaagacgacccagctgcccaagatctgcctggagctggggcgcggccggcgcaagatg
atcggccatacccagccccgccgcctggcggccacctcggtggctaagcgcatcgccgaa
gagctgcgcacgccgatgggcgaagtggtggggtaccaggtgcgcttcaacgaccgcacc
ggcccgaacgcctcgatcaagctgatgaccgacggcattctgctggccgagtcgcagcgc
gatccgctgctgcgccgctacgacaccatcatcatcgacgagacgcacgagcgcagcctg
aacatcgacttcctgctcggctacctcaagcagctgctgccgcgccggcctgacctgaaa
gtcatcatcacctcggccaccatcgacgccgagcgtttcgcgcggcatttcgccgccggc
cccgagcgtccggcgcccgtcatcgaggtgtcggggcgcctgtatccggtggaagtgcgc
taccgcccggtgcagccgcccatgtccgacgaagcggccgccgcgcccgccaagggcggg
cgtgaacgcagcgccggcgacgaagagcgcgacctgatcgacgccatcgtcgacgcggtc
gacgagtgcgcgcgccacggtcccggcgacgtgctggtgttcctgccgggcgagcgcgaa
atccgcgagtcggccgaggcgctgcgcaaacgccatccggtcggcaccgaagtgctgccg
ctgtatgcgcggctgtcgcaggccgagcaggaacagatcttccacccgcgcggcaatgcg
cggcgggtggtgctggccaccaacgtggccgaaacctcgctgaccgtgccgggcatccgc
ttcgtggtcgacagcgggctggcgcgcgtcaagcgctactcctggcgcaacaaggtcgaa
cagttgcgcatcgagccagtcagccgcgcctcggccaaccagcgcgccggccgttgcggc
cggatcggcccgggcctgtgcatccgcctctacgacgagaccgatttcaacgcccgcgcg
ccgttcaccgacccggaggtgctgcgctcctcgctggcgtcggtgatcctgcgcatgaag
tcgctcaagctggacgacatcgagcagtttccgttcgtcgaggcgccgccggggcgcgcc
gtggccgatggctaccacctgctgcaggagctgggcgccatcgagctggccggcgacggc
gaggccgccgaggcgggcggtggcggcgcggcgtttcgcctgacccgcaccggccaggag
ctggccaagctgccggtggacccgcgcatcggccgcatgatcctggccgcgcgcgaacag
cagtgcctggccgagatgctcatcatcgccgccgcattgtcggtgcaggatccgcgcgac
cgcccgatggctgagcgcgaggcggccgaaagcgcgcacgccaagttcgccgacgacaag
tccgaattcctgtcgttcctgaagctgtggcgctggtatggcgagcaggtgcagcacaag
gcatcgcagcgcaagctggtggcgctgctgcgccagaacttcctgtcgccggtgcgcctg
cgcgaatggcacgacgtgcatacccagttggccgcgctggtgggcgagcagggctggcgc
ctgaaccagagcgaggccacctacgagcagctgcacatggcgctgctgtcgggcttgctg
ggcaatatcggtttcaagggcgaagagggcggccagtaccacggcgcgcgcgagatccgt
ttccacatccatcccggctcgcgcctggtcaagaaggccgggcgctggatcgtcgccgcc
gaactggtggaaaccacgcgcctttacgcgcgctgcgtggcgcgcatcgagccggtatgg
ctggagcgcgccgccgcgcacctgctgcgccgcaactggtccgacccgcgctgggagaaa
aaagccgggcaggtggtcgccaacgagcgcgccaccctgtatggcctgctggtgtacaac
ggccggcgggtgcactacggccgcatcaacccgcagcacgcccgcgaactgttcatccgc
cagaccctggtgcccggcgagatcgacacccggctgccgttcgttgcgcacaaccgcaag
ctgatcgccggcatcgagaagctggagcaccaaacgcgccggcccgacatcctggtcgac
gacgagctgatctacgcgttctacgaccgccagttgccggccgacatttcgcaggccgcc
agcctggaaaagtgggtaaacgggctggacaaggccgccgccgcgcgcctgctgcttacg
cgcgacgaactgatgcgccacgaggcggccggcgtgaccaccgacgtgtttcccaagaaa
gtcgagtggcagggcgtggcgatgccgctggactatcacttcgagccgggctcgccgcgc
gacggcgtcacgctgtcggtgcccctgttcgcgctcaaccagctcgacgcgcagcgctgc
gaatggctggtgccgggcatgctcaaggaaaaagcccacctgctgctcaagtcgctgccg
cagaagctgcgccgccattgcgtgccgctgcccgactacgcggcgggcttctacgaacgc
tggtacgagcgccaggccgacccccagcagggcctggtcgatgcgttgatcgccgacatg
tgggaccaggtacaggtgcgcccggcgcccggcgacttcaagctggaaacgctgccggcg
cacctgttcatgaacttcaaggtggtcgacgagcatggccggatgctggccgccgggcgc
aatctggcgcagctcaaggccgaattgggcaagcaggcccaggcgaccttccagcaactg
gcggcgcgcgattcggacgtggcgcaagcgctggcgcacgaaaacctgacgtcctggtcg
ttcggccccttgcccgagatcatggagatcaagcgcggcgggcagtccgtcatcggctac
ccggcgctggtcgatcggggcgcgcattgcgatctcgacgtgttcgacgatcccgacgag
gcgcgccgccaccatcgcgccggcctgctgcggctgttccggctggccttgcgcgagcag
gtcaagttcctggaaaagaacctggccgacctgacgaagatgagcatgctgtacatggcc
ctgggcacgcaggaagagctgcgcgaccagatcatcgattgcgcgctggcgcaggcctgc
ctggccgagccctggccggtcaatgagcagcagttcgaggcgcgccgccaggagggcaag
ggcaggctgggtttgctggcgcaggaggtggcgcgcatggcgcacgccatcctggccgaa
tacggcgccctgcagcgcaagctgccgcaggccaggccgcacgcggcggcctacgccgac
ctgcagcagcaactgggcgtgctgatgccgaaatggttcgtgcgcgacacaccttacgcg
cagctggcgcactatccgcgctatctcaaggcggcggtggcgcgcatcgacaagctgcgc
gccgatccggcgcgcgacgcccgcctgatgggcgagatggcgcccatcctcacccagtac
cagcgcgcgcgcagcgcgctcaagggcgcgcccgatccgcgcctggacgaattccgctgg
ttgctggaagaactgcgggtcgccctgttcgcccaggaattgcgcacccccatgccggtc
tcggtcaagcgcctgatgaaggcctgggagtcgttgcggcggtag
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