Bordetella pertussis 18323: BN118_2729
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Entry
BN118_2729 CDS
T02296
Symbol
hupB
Name
(GenBank) DNA-binding protein Hu-beta
KO
K03530
DNA-binding protein HU-beta
Organism
bper
Bordetella pertussis 18323
Brite
KEGG Orthology (KO) [BR:
bper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bper03032
]
BN118_2729 (hupB)
03036 Chromosome and associated proteins [BR:
bper03036
]
BN118_2729 (hupB)
03400 DNA repair and recombination proteins [BR:
bper03400
]
BN118_2729 (hupB)
DNA replication proteins [BR:
bper03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BN118_2729 (hupB)
Chromosome and associated proteins [BR:
bper03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BN118_2729 (hupB)
DNA repair and recombination proteins [BR:
bper03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BN118_2729 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
CCJ64154
UniProt:
A0A0T7CR47
LinkDB
All DBs
Position
complement(2967932..2968204)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDHIASKADISKAAAGRSLDALIGAVKTTLKKGGTVTLVGFGTFAVSARAARTG
RNPRTGETIKIKKAKVPKFRPGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaccgaactcatcgatcacatcgccagcaaggccgatatctcgaaagccgcc
gccggccgttcgcttgacgccctgatcggtgccgtaaagaccaccctgaagaagggcggc
acggtcacgctggtgggcttcggcactttcgccgtgtccgcgcgcgccgcacgcaccggc
cgcaatccgcgcaccggcgaaacgatcaagatcaaaaaggccaaggtgccgaagttccgt
ccgggcaaggcgctgaaagacgccgtcaactga
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