Bordetella pertussis B1917: B1917_0001
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Entry
B1917_0001 CDS
T03638
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
bpet
Bordetella pertussis B1917
Brite
KEGG Orthology (KO) [BR:
bpet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpet03016
]
B1917_0001 (gidA)
03036 Chromosome and associated proteins [BR:
bpet03036
]
B1917_0001 (gidA)
Transfer RNA biogenesis [BR:
bpet03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
B1917_0001 (gidA)
Prokaryotic type
B1917_0001 (gidA)
Chromosome and associated proteins [BR:
bpet03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
B1917_0001 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
DAO
HI0933_like
AlaDh_PNT_C
Thi4
Pyr_redox
Pyr_redox_3
FAD_binding_3
Tir_receptor_M
Motif
Other DBs
NCBI-ProteinID:
AIW90611
LinkDB
All DBs
Position
1..1920
Genome browser
AA seq
639 aa
AA seq
DB search
MDFPREFDVIVVGGGHAGTEAALAAARAGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLV
KEVDALGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRVLYRNAIRAQLENQPNLWL
FQQAVDDLMVQGDQVVGAVTQIGLRFRARTVVLTAGTFLNGLIHVGLQNYSGGRAGDPPA
NSLGQRLKELQLPQGRLKTGTPPRIDGRSINYSVLEEQPGDLDPVPVFSFLGKASMHPRQ
LPCWITHTNARTHEIIRGGLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKASHQVFLEP
EGLNTHEIYPNGVSTSLPFDVQYELIHSLPGLENAHILRPGYAIEYDYFDPRALKSTLET
KAISGLFFAGQINGTTGYEEAAAQGLLAGANAALQAQGKEPWVPRRDEAYLGVLVDDLVT
RGVTEPYRMFTSRAEYRLSLREDNADLRLTEIGRRLGLVDDVRWDAFSRKRDAVAQEVER
LKSTWVNPRVLPAHAAEALLGKAIEREYSLSDLLKRPNVSYEALMQARTDEGELLAGPGV
LEDQVLAEQVETQVKYAGYIARQQDEVQKHLSHEQQPIPADIDYDAVTSLSFEVRQKLKT
HRPETIGQAARVSGVTPAAISLLLIHLKRLHYGSRKQAA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggattttccccgcgaatttgatgtgatcgtcgttggtggcggtcacgccggtacggag
gcagccctggctgcagcccgcgccggcgcacagacattgctgcttacccacaatatcgag
accctgggccaaatgtcctgcaatccctccatcggggggataggcaagggtcatttggtc
aaggaagtcgatgcgttgggcggcgcgatggctatcgccaccgacgaggcaggtatccaa
ttccgtattctcaacagctccaaggggccagcggtacgtgccacgcgtgcccaagccgac
cgggtgctgtaccgaaacgccatacgtgcacagctcgagaaccagcccaacctctggctg
ttccagcaggcggtggacgatctgatggtgcagggcgaccaggtggtgggcgccgttacg
cagatcgggttgcgctttcgtgcccgtaccgtggtgctgacggctgggaccttcctcaac
ggtttgattcacgtggggctgcagaactattccggagggcgggcaggggatcctcccgcc
aattccctgggccagcggctcaaggagctgcaacttccgcaaggccgcctgaaaactggc
acgccgccgcgcatcgacggacgcagcatcaactacagtgtgttggaagagcagcccggc
gatcttgatcccgtgccggtgttctcgttcctgggcaaggcctccatgcacccgcgccag
ctgccttgctggatcacgcataccaatgcccgcacgcacgaaatcatccgtggcggtctg
gaccgttcgcccatgtacagtggggtcatcgaaggagtggggcctcgttactgcccatcc
atcgaggacaagatccatcgttttgcggacaaggcatcgcaccaggtattcctggaaccg
gaaggcctgaatacccatgagatctatccgaacggtgtttccaccagcctgcctttcgat
gtgcagtacgagttgatccattccctgcccggactggagaacgcgcacatcctgcgcccg
ggctatgccatcgagtacgattacttcgacccgcgtgccctgaagtccacgctggagacc
aaggcgatttccgggctgttcttcgccggccagatcaacggcacgaccggctatgaagag
gcggcggcccaaggcctgctggccggcgccaatgccgccttgcaggcccaggggaaagaa
ccttgggtgccgcgtcgcgatgaagcctatctcggcgtcctggtcgatgacctggttacg
cgcggcgtgaccgagccttatcggatgttcacgtcccgtgccgaatatcggctcagcctg
cgcgaagacaacgccgatctgcgcctgaccgaaatcggccgccggctcgggctggtggac
gacgtgcgctgggatgctttcagccgcaaacgcgatgccgtggcccaggaagtcgaacgg
ctcaaatccacgtgggtgaacccgcgcgtcctgccggcgcatgccgccgaagccctgctg
ggcaaggcaattgagcgtgagtactcactatcagacctgttgaaacgtcccaatgtttcc
tacgaggcgttgatgcaggcccgtaccgacgagggcgagttgctggctggtcctggcgtg
ctcgaggatcaagtgctggccgagcaggtcgaaacccaggtcaagtacgccggctatatc
gcgcgccagcaagacgaagtgcagaaacacctctcgcacgagcagcagcccatccctgcg
gatatcgattacgacgccgtcaccagcctgtcgttcgaggtacgccagaagctgaagacg
catcggcccgagaccatagggcaggccgcgcgcgtctccggggtgacgccggctgccatt
tccctgttgctgatccatctcaagcgcctgcattacggctcgcgcaagcaagcggcatga
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