KEGG   Bordetella pertussis B1917: B1917_0758
Entry
B1917_0758        CDS       T03638                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
bpet  Bordetella pertussis B1917
Pathway
bpet00300  Lysine biosynthesis
bpet00470  D-Amino acid metabolism
bpet01100  Metabolic pathways
bpet01110  Biosynthesis of secondary metabolites
bpet01120  Microbial metabolism in diverse environments
bpet01230  Biosynthesis of amino acids
Module
bpet_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bpet00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    B1917_0758 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    B1917_0758 (dapF)
Enzymes [BR:bpet01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     B1917_0758 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AIW91261
LinkDB
Position
794809..795720
AA seq 303 aa
MGDNPCMMWNFTKMHGAGNDFVVLDGVRQDIAMTPERARALADRHFGIGADQILLVEPAT
RADADFRYRIFNADGSEVEHCGNGARCFVRFVHEQGLSARNPLRAEIVTGVIVLDEGEDE
QVTVDMGSTRFDPPSLPFDSTGLSAQTQGQDTVWNLEIDAPAGLPRSVAISTVAISNPHA
VQVVDDVDAAPVGVIGPLVESHPRFARRVNVGFMQVVDRHQIRLRVYERGAGETLACGTG
ACAAVAAGVRRGLLDSPVRVHTRGGMLTVDWNGERLRMTGPAISVFSGQVDIDRLVFTSG
LHR
NT seq 912 nt   +upstreamnt  +downstreamnt
atgggtgataatccatgcatgatgtggaacttcaccaaaatgcacggcgcgggcaacgac
ttcgtcgtgctcgatggcgtccgtcaagacatagcgatgacgcccgagcgcgcccgcgcg
ctggccgaccgccatttcggcatcggcgccgaccagatcctgctggtcgaacccgccacg
cgggccgacgccgatttccgctaccgcattttcaacgccgacggcagcgaagtcgaacac
tgcggcaacggcgcgcgctgtttcgtgcgtttcgtgcacgagcaaggcctgtcggcgcgc
aatccgctgcgcgccgagatcgtgaccggcgtcatcgtgctggacgagggcgaagacgag
caggtcaccgtcgacatgggcagcacccgcttcgacccgccgtccctgccgttcgactcc
accggcctgagcgcccagacgcagggccaggatacggtctggaacctggagatcgacgcg
ccggccggcctgccgcgcagcgtggcgatctcgaccgtggccatttccaacccgcacgcc
gtgcaggtggtcgacgatgtcgacgccgcgccggtcggtgtgatcggcccgctggtcgaa
tcgcacccgcgcttcgcgcgccgcgtcaacgtcggcttcatgcaggtcgtcgaccgccac
cagatccgtctgcgcgtctacgaacgcggcgccggcgaaacgctggcctgcggcaccggc
gcctgtgcggccgtcgccgcgggcgtgcggcgcggcctgctcgattcgccggtgcgcgta
cacacgcgcggcggcatgcttaccgtggactggaacggcgagcgcctgcgcatgaccggt
ccggccatttccgttttcagcggccaggtcgatatcgaccgcctggtgttcaccagcggc
ctgcaccgttag

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