KEGG   Bordetella pertussis B1917: B1917_1796
Entry
B1917_1796        CDS       T03638                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bpet  Bordetella pertussis B1917
Pathway
bpet03030  DNA replication
bpet03430  Mismatch repair
bpet03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpet00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B1917_1796
   03430 Mismatch repair
    B1917_1796
   03440 Homologous recombination
    B1917_1796
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpet03032]
    B1917_1796
   03400 DNA repair and recombination proteins [BR:bpet03400]
    B1917_1796
Enzymes [BR:bpet01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B1917_1796
DNA replication proteins [BR:bpet03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B1917_1796
DNA repair and recombination proteins [BR:bpet03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B1917_1796
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AIW92182
LinkDB
Position
1913382..1914056
AA seq 224 aa
MPVGPAGRCFYCCFGINMAYFRRYTTPHPYGQTLRAGAAAGRASAARDGLRALDGPFVVA
DLETTGLSVATCEILEFAAVRVSACGQIEREFTQVVRTDGRVLPFISRLTGITQAEVERD
GVPVRQAFGDFLDFIEGGPLFFHNASFDRRFLQAAADRTGLPFEAQTHCTLMLARQAWPE
LPSHKLNVLARHLGASEPTHRALADVRTTVAVALAARARLAAQG
NT seq 675 nt   +upstreamnt  +downstreamnt
atgcccgttggacccgcagggcgttgtttttattgttgtttcggtatcaatatggcctat
ttccgtcgctacaccacgccccatccctatgggcagaccctgcgcgctggcgccgcggcc
ggccgcgccagcgccgcgcgcgacggcttgcgggcgctggatgggccgttcgtggtggcc
gacctggaaaccaccgggctgtccgttgccacgtgcgaaatcctcgaattcgccgccgtg
cgcgtcagcgcatgcgggcagatcgagcgcgagttcacccaggtggtgcgcaccgacggc
agggtgctgccgttcatttcgcgcctgaccggcatcacccaggccgaagtcgagcgcgat
ggcgtgccggtgcggcaggcgttcggcgacttcctcgacttcatcgagggcgggccgctg
tttttccataacgcttcgttcgatcgccgcttcctgcaggccgcggccgatcgcaccggc
ctgccgttcgaggcgcagacccattgcacgctgatgctggcgcgccaggcctggcccgag
ctgccgtcgcacaagctgaacgtgctggcccgccatctcggcgcgtccgagccgacccac
cgggccctggccgacgtgcgcaccaccgtggccgtggcgttggctgcgcgtgcgcggctg
gcggcgcagggctga

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