Bordetella pertussis B1917: B1917_1938
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Entry
B1917_1938 CDS
T03638
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bpet
Bordetella pertussis B1917
Brite
KEGG Orthology (KO) [BR:
bpet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpet03000
]
B1917_1938
Transcription factors [BR:
bpet03000
]
Prokaryotic type
Helix-turn-helix
Other families
B1917_1938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
AAA_lid_14
HTH_8
Sigma54_activ_2
HTH_30
AAA_5
PAS_8
HTH_29
PAS
HTH_28
HTH_23
HTH_1
nSTAND3
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AIW92300
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Position
2057477..2059342
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AA seq
621 aa
AA seq
DB search
MPGYQLSASGQHLPSTQAAAPIVRSWERCASAAADLHDDPVALRHGDLQERLEQHACVLR
AAQPEIETLAGMVASASSLVLLADASGVILQASGNTGFLQRADHVALRPGVSWAENHRGT
NAIGTALIEAAALRVHGAEHFLRRNQILSCHAAPIRSPRGEILGVLDISGDAGRMHAYAL
SLASMCARQVANRVIEQAGERCLYLVFHKQASLLDSVERGLLLIEDERIVGANDAAVALL
GATWPALLDQPLDGWLVDWRAVARTPGRVHTPQGAPFHAVLRQGGHARSLPAPPRPPRAM
PAQAPEETLPALAPALQAGFERARRALDGGLSVLLQGETGAGKEVYAQHLYRRSIWRDGP
FVAVNCGALPESLIEAELFGYEPGAYTGARRLGARGRLREADGGVLFLDEIGDMPLALQT
RLLRALQERMVQPLGADKAVPVNFGLVSATHRDLDAMIAAGEFRADLYYRLHDYAVPLPR
LRERDDLRPFICAALRALDDTPAGLTLADDALDALAAYAWPGNYRQLRSVLRTLALFHPP
GSLIHRHHLPAAIAAPAVHAADGAAPPPSVVAPPAAATLRDAGLHRIDQALARHGGNIAG
AAHELGIHRSTLYRHLARQRG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctaccagctttccgcatccggccagcacctgccgtccacgcaggccgccgct
cccatcgtgcgctcctgggagcgctgcgccagcgccgccgccgacctgcacgacgacccc
gtcgccctgcgccacggcgacctgcaggaacgcctcgagcagcacgcctgcgtgctgcgc
gccgcccagcccgaaatcgaaaccctggccggcatggtggccagcgcctccagcctggtg
ctgctggccgacgccagcggcgtgatcctgcaggcaagcggcaataccgggttcctgcag
cgcgccgaccacgtggcgctgcggcccggggtcagctgggccgaaaaccatcgcggcacc
aacgccatcggcacggcgctgatcgaagccgccgcgctgcgcgtgcacggcgccgaacac
ttcctgcggcgcaaccagatcctcagctgccacgcggcgccgatccgttcgccgcgcggc
gagatcctcggcgtgctggatatctcgggcgacgccgggcgcatgcacgcctatgcgctg
agcctggccagcatgtgcgcgcgccaggttgccaaccgcgtcatcgagcaggccggcgag
cgctgcctgtacctggtcttccacaagcaggcctcgctgctcgattcggtcgaacgtggg
ctgctgctgatcgaggacgaacgcatcgtcggcgccaacgatgccgccgtcgcgctgctg
ggcgccacctggcccgcgctgctggaccagccgctggacggctggctggtcgattggcgc
gccgtcgcgcgcacgcccggccgcgtccatacgccgcaaggcgcacccttccatgccgtg
ctgcgccagggcgggcatgcgcgctcgctgcccgcgccgccgcgcccgccgcgcgccatg
ccggcacaggcgcccgaggaaacgctgccggcgctggcgccggcgctgcaggccggcttc
gaacgcgcccggcgcgcgctcgacggcggcctgtcggtgctgctgcaaggcgaaaccggc
gccggcaaggaagtctacgcacagcacctgtaccgccgcagcatctggcgcgacggtcca
ttcgtcgccgtcaattgcggcgccctgcccgaaagcctgatcgaggccgaactgttcggc
tacgagccgggcgcctataccggcgcgcggcggctgggcgcgcgcggccggctgcgcgaa
gccgacggcggcgtgctgttcctggacgaaatcggcgacatgccgctggccctgcagacc
cgcctgctgcgcgccctgcaggagcgcatggtgcagccgctgggcgccgacaaggcggtg
ccggtcaacttcggcctggtcagcgccacccaccgcgacctggacgccatgatcgccgcc
ggcgagttccgcgccgacctctattaccgcctgcacgactatgcggtccccttgccgcgg
ctgcgcgagcgcgacgatctgcgcccctttatctgcgccgccttgcgcgcgctggacgac
acgcccgccggcctgacgctggccgacgacgccctcgacgcgctggccgcctatgcgtgg
ccgggcaactaccggcagctgcgctcggtgctgcgcacgctggcgctgttccatccgccc
ggcagcctgatccatcgccaccacctgcccgccgccatcgccgcgcccgccgtccacgcg
gccgacggcgccgcgccgcccccgagcgtggtggccccgcccgcggccgccacgctgcgc
gacgccggcctgcaccggatcgaccaggccctggcccgccacggcggcaatatcgccggg
gccgcgcacgaactcggcatccatcgcagcacgctgtaccgccacctggcgcgccagcgc
ggctag
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