Bordetella pertussis B1917: B1917_2110
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Entry
B1917_2110 CDS
T03638
Symbol
rumA
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bpet
Bordetella pertussis B1917
Brite
KEGG Orthology (KO) [BR:
bpet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpet03009
]
B1917_2110 (rumA)
Enzymes [BR:
bpet01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
B1917_2110 (rumA)
Ribosome biogenesis [BR:
bpet03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B1917_2110 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
TRAM
RrnaAD
Methyltransf_31
Methyltransf_32
TRM5-TYW2_MTfase
Methyltransf_11
Methyltransf_23
PCMT
DOT1
Motif
Other DBs
NCBI-ProteinID:
AIW92453
LinkDB
All DBs
Position
complement(2237452..2238852)
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AA seq
466 aa
AA seq
DB search
MVDVLNIESLDLEARGIAHRDGKVLFVEGALPGERVTVQTVRRKPSYEIAKVEEVLRPSS
QRVAPRCPHFGVCGGCAMQHLAPAAQVAIKQRALEDTFWHVGKLKPARILPPLYGPTWGY
RYRARLSVRVVPKKGGVLVGFHERKSSYVADMRECHVLPPAVSRLLLPLRAMIAAMSAPD
RMPQIEVALGDETIVLVLRHLLPLTDGDIAVLRAFAAEHGVQWWLQSKGPDTVHPLEREH
ADALAYTLPEFGLRMPYRPTDFTQVNHAINRAMVSRALKLLDVQPQDRVADLFCGLGNFT
LPLATQGREAVGVEGSKALTDRAHEAAARHGLGERTRFATLNLFEVDVQWLRGLGYFDRM
LIDPPREGAQAVAQALSLLAPGERPRRIVYVSCSPGTLARDAAIMVHEGGYALRSAGVIN
MFPHTGHVESIAVFESLDEATVLQAQAQARQKAREEAERLAEAAAA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgttttgaatattgagtccctggacctcgaggcccgggggatagcccaccgt
gacggcaaagtgctgttcgtggaaggcgccttgcccggcgagcgggtcacggtgcagacg
gtgcgccgcaagccgtcctacgagattgccaaggtcgaggaggtcctgcgcccgtcctcg
cagcgcgtggcgccgcgctgcccgcatttcggcgtttgcggcggctgtgccatgcagcac
ctggcgcccgcggcccaggtcgcgatcaagcagcgcgcgctcgaagacactttctggcac
gtgggcaagctcaagccggcgcgcatcctgccgccgctctatggcccgacctggggctac
cgctatcgcgcccgcctgtcggtgcgcgtcgtgcccaagaagggcggggtgctggtgggc
tttcatgaacgcaagagcagctacgtggccgacatgcgcgaatgccatgtgctgccgccg
gcggtcagccgcctgctgctgcccctgcgcgccatgatagcggccatgtcggcgccggac
cgcatgccccagatcgaggtcgcattgggcgacgagacgatcgtgctggtgttgcgccac
ctgctgccgctgaccgacggcgatatcgccgtgctgcgcgcgtttgccgccgagcacggg
gtgcagtggtggctgcagtccaagggcccggataccgtgcatccgctagagcgcgagcat
gccgacgcgctggcctataccctgcccgagttcgggctgcgcatgccttaccggccgacg
gatttcacccaggtcaaccacgccatcaaccgcgctatggtgtcgcgcgccctgaagctg
ctggatgtgcagccgcaggaccgcgtggcggacctgttctgcggcctgggcaatttcacg
ttgccgctggccacccaggggcgcgaggcggtgggggtggagggcagcaaggcgctgacc
gaccgcgcgcacgaggcggcggcgcgtcatgggctgggcgagcgcacccgtttcgccacg
ctcaacctgttcgaggtcgatgtgcaatggctgcgcgggctgggctacttcgaccgcatg
ctgatcgacccgccgcgggaaggcgcgcaggctgtcgcgcaggcgctgtcgctgctggct
ccgggcgagcggccgcgccgcatcgtgtacgtctcctgtagtccaggcaccctggcgcgc
gacgccgccatcatggtgcacgaaggcggctatgcgctgcgcagcgctggcgtcatcaac
atgttcccgcataccggccatgtcgaatcgatcgcagtgttcgagtcgctcgacgaggcg
acggtgctgcaagcgcaggcccaggcgcggcagaaggcgcgcgaggaggccgagcgcctt
gccgaggcggccgctgcctga
DBGET
integrated database retrieval system
