Bordetella pertussis B1917: B1917_3309
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Entry
B1917_3309 CDS
T03638
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
bpet
Bordetella pertussis B1917
Brite
KEGG Orthology (KO) [BR:
bpet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpet03032
]
B1917_3309 (hupB)
03036 Chromosome and associated proteins [BR:
bpet03036
]
B1917_3309 (hupB)
03400 DNA repair and recombination proteins [BR:
bpet03400
]
B1917_3309 (hupB)
DNA replication proteins [BR:
bpet03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
B1917_3309 (hupB)
Chromosome and associated proteins [BR:
bpet03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
B1917_3309 (hupB)
DNA repair and recombination proteins [BR:
bpet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
B1917_3309 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
AIW93536
LinkDB
All DBs
Position
3513780..3514052
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDHIASKADISKAAAGRSLDALIGAVKTTLKKGGTVTLVGFGTFAVSARAARTG
RNPRTGETIKIKKAKVPKFRPGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaccgaactcatcgatcacatcgccagcaaggccgatatctcgaaagccgcc
gccggccgttcgcttgacgccctgatcggtgccgtaaagaccaccctgaagaagggcggc
acggtcacgctggtgggcttcggcactttcgccgtgtccgcgcgcgccgcacgcaccggc
cgcaatccgcgcaccggcgaaacgatcaagatcaaaaaggccaaggtgccgaagttccgt
ccgggcaaggcgctgaaagacgccgtcaactga
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