Bordetella pertussis B1917: B1917_3664
Help
Entry
B1917_3664 CDS
T03638
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bpet
Bordetella pertussis B1917
Pathway
bpet00300
Lysine biosynthesis
bpet00470
D-Amino acid metabolism
bpet01100
Metabolic pathways
bpet01110
Biosynthesis of secondary metabolites
bpet01120
Microbial metabolism in diverse environments
bpet01230
Biosynthesis of amino acids
Module
bpet_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bpet00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B1917_3664 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B1917_3664 (lysA)
Enzymes [BR:
bpet01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
B1917_3664 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AIW93863
LinkDB
All DBs
Position
complement(3873831..3875120)
Genome browser
AA seq
429 aa
AA seq
DB search
MTAVSVQPDLAGSPHFRYQNGVLHAEDVPLDSLAAQLGTPLYVYSRAALRSAWETYRDAI
GERPVLVCFGMKTNSNLAVLKEFARLGAGFDIVSGGELARVLAVGGDPAKVVFSGVGKQA
WEMRAALEADVKCFNVESEAELERLSDVAVSMGRRARVSLRVNPDVDAQTHPYISTGLKE
NKFGIAIESAPAAYRLAARLPGVEVVGVDCHIGSQLTDISPYFDALEKLLDLIEQLAENG
IAIKHLDLGGGLGIRYTDEIPPSPKALLDRVFERINARGLGHLHIVLEPGRSLAGNAGVL
LTTVQYLKHAEARNFAIVDAAMNDLLRPALYEAYHGVQPVTPRADKRIEYDVVGPVCESA
DWLARGRALAIQAGDVLAVESAGAYSMVMASNYNTRVRAAEVMVDGNRHYIVRQRETLES
LYQGESTLP
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgtttccgtccagcccgacctggctggctcgccccatttccgctaccagaac
ggcgtgctgcacgccgaagacgtgccgctcgacagcctggccgcccagttgggcacgccg
ctgtacgtctattcccgcgccgcgctgcgctcggcctgggagacctatcgcgacgccatc
ggcgagcgcccggtgctggtgtgcttcggcatgaagaccaactccaacctggccgtgctg
aaggaattcgcacgcctgggcgccggcttcgacatcgtgtccggcggcgagctggcgcgc
gtgctggccgtgggcggcgaccccgccaaggtcgtgttctccggcgtgggcaagcaggcc
tgggaaatgcgcgccgcgctcgaagccgacgtgaagtgcttcaacgtcgagtccgaggcc
gaactcgagcgcctgtccgacgtcgccgtctccatgggccggcgcgcgcgcgtatcgctg
cgcgtcaaccccgacgtcgacgcccagacccatccctacatctcgacgggcctgaaggaa
aacaagttcggcatcgccatcgagtccgcgccggcggcataccggctggcggctcgcctg
cccggcgtcgaagtggttggcgtcgattgccatatcggctcgcagctcaccgacatcagc
ccgtacttcgacgcactggaaaagctgctggacctgatcgagcagctggccgagaacggc
atcgccatcaagcacctggacctcggcggcggcctgggcatccgctacacggacgaaatc
ccgccctcgcccaaggccttgctcgaccgggtgttcgagcgcatcaacgcgcgcggcctg
gggcacctgcatatcgtgctggaacccggccgctcgctggccggcaatgccggcgtgctg
ctgaccacggtgcaatacctcaagcacgccgaggcgcgcaacttcgccattgtcgacgcg
gccatgaacgacctgctgcgcccggccctgtacgaggcctaccacggcgtgcagccggtc
acgccgcgggccgacaagcggatcgagtacgacgtcgtcgggccggtctgcgaaagcgcc
gactggctggcgcgcggccgcgccctggcgatccaggccggcgacgtgctggcggtggag
tcggccggcgcctacagcatggtcatggccagcaactacaacacccgggtgcgcgcggcc
gaagtcatggtcgacggcaaccgccactacatcgtgcgccagcgcgaaacgctggagtcg
ctgtaccagggcgagtccacgctgccctga
DBGET
integrated database retrieval system