Bordetella pertussis 137: Q425_24050
Help
Entry
Q425_24050 CDS
T03754
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpeu
Bordetella pertussis 137
Pathway
bpeu00260
Glycine, serine and threonine metabolism
bpeu00460
Cyanoamino acid metabolism
bpeu00630
Glyoxylate and dicarboxylate metabolism
bpeu00670
One carbon pool by folate
bpeu00680
Methane metabolism
bpeu01100
Metabolic pathways
bpeu01110
Biosynthesis of secondary metabolites
bpeu01120
Microbial metabolism in diverse environments
bpeu01200
Carbon metabolism
bpeu01230
Biosynthesis of amino acids
bpeu01240
Biosynthesis of cofactors
bpeu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bpeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Q425_24050 (glyA)
09102 Energy metabolism
00680 Methane metabolism
Q425_24050 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Q425_24050 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Q425_24050 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Q425_24050 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Q425_24050 (glyA)
Enzymes [BR:
bpeu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Q425_24050 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AJB27015
LinkDB
All DBs
Position
2524038..2525285
Genome browser
AA seq
415 aa
AA seq
DB search
MFNRNLTLDQVDPDVWAAIQKEDVRQEQHIELIASENYASPAVMQAQGTQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRLKQIFGAEAANVQPNSGSQANQGVYMAVLKPGDTVLGMS
LAEGGHLTHGASVNASGKLYNFVPYGLDADEVLDYAQVERLTKEHKPKLIVAGASAYALH
IDFERMARIAHDNGALFMVDIAHYAGLVAGGAYPNPVPHADFVTSTTHKSLRGPRGGVIM
MKAEFEKAVNSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFQDYAQQVVKNAKVLADTLV
KRGLRIVSGRTESHVMLVDLRPKGITGKEAEAVLGQAHITVNKNAIPNDPEKPFVTSGIR
LGTPAMTTRGFKEAEAELTANLIADVLDNPRDEANIAAVRARVNELTARLPVYGN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaccgcaacctgaccctcgaccaggtggatcccgacgtctgggccgccatccag
aaagaagacgtacgccaggaacagcacatcgagctgatcgcgtccgagaactacgccagc
cccgccgtgatgcaggcccagggcacgcaactgaccaacaagtatgcggaaggctacccg
ggcaagcgctactacggcggttgcgagtacgtcgacgtggtcgagcagctggccatcgac
cgcctgaagcagattttcggcgccgaggccgccaacgtgcagccgaactccggctcgcag
gccaaccagggcgtgtacatggcggtgctcaagccgggcgataccgtgctgggcatgagc
ctggccgaaggcggtcacctgacgcacggcgcgtcggtcaacgcctcgggcaagctgtac
aacttcgtgccctacggcctggacgccgacgaggtgctggactacgcccaggtcgagcgg
ctgaccaaggaacacaagcccaagctgatcgtggccggcgcctccgcgtacgcgctgcac
atcgacttcgagcgcatggcgcgcatcgcccacgacaacggcgcgctgttcatggtggac
atcgcccactatgccggcctggtggccggcggcgcctatcccaacccggtgccgcacgcc
gatttcgtcacctccaccacgcacaagtcgctgcgcggcccgcgcggcggcgtcatcatg
atgaaggccgagttcgagaaggccgtcaattcggccatcttcccgggcatccagggcggt
ccgctgatgcacgtcatcgcggccaaggccgtggccttcaaggaagcgctgtcgcccgag
ttccaggattacgcccagcaggtcgtcaagaacgccaaggtgctggccgatacgctggtc
aagcgcggcctgcgcatcgtgtcgggcaggaccgaaagccacgtcatgctggtggacctg
cgtcccaagggcattaccggcaaggaagcggaagcggtgctgggccaggcccacatcacg
gtcaacaagaacgccattcccaacgacccggaaaagcccttcgtgaccagcggcatccgc
ctgggcactccggccatgaccacccgcggcttcaaggaggccgaggccgagctgaccgcc
aacctgatcgccgacgtgctggacaatccgcgcgacgaggcgaacatcgccgcggtgcgc
gcgcgggtcaatgaactgaccgcccgcctgcccgtctacggcaactga
DBGET
integrated database retrieval system