Alkalihalophilus pseudofirmus: BpOF4_00565
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Entry
BpOF4_00565 CDS
T01165
Name
(GenBank) large ribosomal pseudouridine synthesis protein
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
bpf
Alkalihalophilus pseudofirmus
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpf03009
]
BpOF4_00565
Enzymes [BR:
bpf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
BpOF4_00565
Ribosome biogenesis [BR:
bpf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BpOF4_00565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
DUF3892
S4_2
Motif
Other DBs
NCBI-ProteinID:
ADC48182
UniProt:
D3FTB4
LinkDB
All DBs
Position
complement(2395310..2396224)
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AA seq
304 aa
AA seq
DB search
MEEIQWTILEENKNERIDKFLTAQNGEWSRSQVQQWIKDGQVQVNGKATKSNYKMQVEDQ
VTLSIPEPEELDVIAEDIPLDVVYEDADVIVVNKPRGMVVHPAPGHYTGTLVNALLYHCK
DLSGINGVIRPGIVHRIDKDTSGLLMVAKNDHAHESLVSQLKAKTTKRHYKAIVHGVIPH
QHGTIEAPIGRDKKDRQSMTVTEDNSRDAVTHFTVLECFKDFTYVQCELETGRTHQIRVH
MKYIGYPLAGDPKYGPKKKTLEIEGQALHAATLGFTHPRTGEELEFSAPIPEDMEHLLHY
LRKK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaattcaatggacaattttagaagagaataaaaacgaacgaattgataaattt
ctaactgctcaaaatggtgagtggtcaagatctcaagtgcaacaatggatcaaagacggt
caagtccaagttaatggaaaggccactaaatctaattataaaatgcaagtagaggaccaa
gtcactttatctattcctgagcctgaagagttagacgttattgcagaagacattccatta
gatgtcgtgtatgaagatgcagatgtcattgtggtgaataaaccgcgcggtatggtagta
cacccagctccaggccactatacgggtacactggtaaatgccttgctgtatcattgtaaa
gatttgtctggaatcaacggtgttattaggccgggaattgtacacagaattgataaagat
acgtcaggattactgatggtagcaaaaaatgatcatgcacatgaatcattagtgagccag
ttaaaagcaaaaacaaccaaacgacattacaaagcgattgtgcatggggtcatcccgcac
caacatggaacgattgaggcgccaattggtcgtgataaaaaagatcgtcaaagcatgacg
gtaacagaagataacagccgcgatgcagtgactcactttactgtactcgaatgttttaaa
gactttacgtatgtacagtgtgaattagaaacaggacgtacccaccaaattcgtgttcac
atgaagtacattggatatcctttagctggagatcctaaatacggtccgaaaaagaaaacg
ctcgagattgaagggcaggctctgcatgcggcaacgttaggtttcacccatccgagaaca
ggggaggagctagagttttctgcccctatcccagaagatatggaacatttacttcattat
ttacgaaagaagtaa
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