Alkalihalophilus pseudofirmus: BpOF4_02600
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Entry
BpOF4_02600 CDS
T01165
Symbol
rocR
Name
(GenBank) transcriptional activator of arginine utilization operons
KO
K06714
arginine utilization regulatory protein
Organism
bpf
Alkalihalophilus pseudofirmus
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpf03000
]
BpOF4_02600 (rocR)
Transcription factors [BR:
bpf03000
]
Prokaryotic type
Helix-turn-helix
Other families
BpOF4_02600 (rocR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS_9
PAS
AAA_5
PAS_4
HTH_30
AAA_19
AAA_16
Mg_chelatase
AAA_3
HTH_1
I-TevI_DNA-bd
AAA
HTH_20
HTH_50
ATPase
HTH_10
HTH_28
MCM
HTH_24
AAA_7
TsaE
Motif
Other DBs
NCBI-ProteinID:
ADC48587
UniProt:
D3FW55
LinkDB
All DBs
Position
2783490..2784914
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AA seq
474 aa
AA seq
DB search
MNRVSPKQLEQTVDILTQVLDTIDVGVHIVNSHGETIMYNKKMTEIESMPPHEVLHKNLL
DVFLFKEEQTSTLLQALHKGQHSYNIKQQYYNNKGFPITAVNDTHPLKDKDGEIIGAFEL
SKDITRLEVLMKDQLHKSDQTRYTFSKIIGQSEAISQIIHEAKRATRTSSSVLLTGETGT
GKEIFAQSIHNGSERAGGPFISQNCAALPDNLIEGILFGTKKGAFTGAVEHPGLFEQAEG
GTLLLDEINSLNLPLQAKLLRAIQEKTIRRVGDTKDTPVDVRIISTMNEDPFEAVSNGRL
RKDLFYRLGVVSLYIPPLKDRYGDIPLLVEHFLAKFNKRFQMQVDWISADVLELFEQYEW
PGNVRELEHVIESAMNIMSTERQMELYHLPMHIRRRFTAQTEPTEGKAEHVSEAKETFLH
KPLKEHLAEVENYYIKQALTVHKGNISQAAKALGISRQNLQYRLKKMTLSEEDL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtgttagtccaaaacaactagagcaaactgtagacattcttacacaagtgtta
gataccatcgatgtcggtgttcatatcgttaattctcatggggaaaccattatgtacaat
aagaaaatgacagaaattgagtctatgcccccgcatgaggtattacataaaaatttatta
gatgtgtttctctttaaagaagagcaaaccagcacgctcctgcaagcattacataaaggt
cagcattcctataatattaagcagcaatattataataataaagggtttccaataacggct
gtgaatgacactcaccctcttaaagataaggacggggagatcattggtgcgtttgagtta
tcaaaagatatcacccgtctagaagtattaatgaaagatcaattgcacaaatccgatcaa
acccgctatacgttctctaagattatcggccaaagtgaagcaatctcacaaatcattcac
gaagcaaagcgtgcgacccggacgagttcttctgttctgttaactggcgagaccggcact
ggcaaagaaatttttgctcaaagcatccataatggcagtgaacgggctggaggtccgttt
atttctcaaaactgcgcagcccttcctgataatcttattgaaggtattttattcggtaca
aagaaaggtgcttttacaggagccgttgaacaccctggcttatttgagcaagcagaaggt
gggacccttcttttagatgaaatcaattcattaaacctgcccctgcaggcaaagttatta
cgagcaattcaagagaaaaccattagacgggtcggcgatacgaaagatactccggttgat
gtgcggatcatctcaacgatgaatgaagatccatttgaagccgtatcaaacggccgcctc
agaaaagacctgttttacaggctcggtgtcgtctccttgtacatcccgccgcttaaggat
cgatacggggatatccccttactggtcgaacattttttagctaaatttaataaacgattt
caaatgcaggttgattggatttcagcagatgttcttgaattatttgagcagtatgaatgg
cctggcaacgtgcgtgaattagagcatgtgattgaatcagccatgaacattatgtcaaca
gagcgtcaaatggagctttatcatttgcctatgcatattagaagaaggttcaccgcacaa
acagagcccacagaaggtaaagccgaacatgtgagtgaagctaaggaaactttcttacac
aagccgcttaaagaacatcttgccgaagtagaaaattactatattaaacaggctttaacg
gtgcataaaggcaacatctcccaagcagctaaagcgcttggaatcagccgccaaaacctt
cagtaccgattaaagaaaatgacgttatctgaagaggatttataa
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