Alkalihalophilus pseudofirmus: BpOF4_04680
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Entry
BpOF4_04680 CDS
T01165
Symbol
hbsU2
Name
(GenBank) DNA-binding protein HU, Hbsu-like protein
KO
K03530
DNA-binding protein HU-beta
Organism
bpf
Alkalihalophilus pseudofirmus
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpf03032
]
BpOF4_04680 (hbsU2)
03036 Chromosome and associated proteins [BR:
bpf03036
]
BpOF4_04680 (hbsU2)
03400 DNA repair and recombination proteins [BR:
bpf03400
]
BpOF4_04680 (hbsU2)
DNA replication proteins [BR:
bpf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BpOF4_04680 (hbsU2)
Chromosome and associated proteins [BR:
bpf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BpOF4_04680 (hbsU2)
DNA repair and recombination proteins [BR:
bpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BpOF4_04680 (hbsU2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
Ribosomal_L12
UPF0181
Motif
Other DBs
NCBI-ProteinID:
ADC49000
UniProt:
D3FYW7
LinkDB
All DBs
Position
3198555..3198827
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AA seq
90 aa
AA seq
DB search
MNKTELINEVAERTQLSKKDAGNAVNEVFDVISETMSKGETVQLIGFGNFEVRERAARKG
RNPQTGEEIDIPATKTPAFKAGKQLKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacagaacttattaatgaagttgctgaacgtacgcaattatctaaaaaagat
gcagggaacgcagtaaatgaagtatttgatgtgatttcagaaacaatgtcaaaaggcgag
accgttcaattgatcggttttggaaactttgaagtgcgtgaacgtgctgcaagaaaaggg
cgcaatccgcaaactggtgaagaaattgatattcctgcaacaaaaacaccggcattcaaa
gctggtaaacaactgaaagatgctgttaagtaa
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