Alkalihalophilus pseudofirmus: BpOF4_06910
Help
Entry
BpOF4_06910 CDS
T01165
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpf
Alkalihalophilus pseudofirmus
Pathway
bpf00260
Glycine, serine and threonine metabolism
bpf00460
Cyanoamino acid metabolism
bpf00630
Glyoxylate and dicarboxylate metabolism
bpf00670
One carbon pool by folate
bpf00680
Methane metabolism
bpf01100
Metabolic pathways
bpf01110
Biosynthesis of secondary metabolites
bpf01120
Microbial metabolism in diverse environments
bpf01200
Carbon metabolism
bpf01230
Biosynthesis of amino acids
bpf01240
Biosynthesis of cofactors
bpf04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BpOF4_06910 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BpOF4_06910 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BpOF4_06910 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BpOF4_06910 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BpOF4_06910 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BpOF4_06910 (glyA)
Enzymes [BR:
bpf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BpOF4_06910 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ADC49440
UniProt:
D3G0G5
LinkDB
All DBs
Position
complement(3650277..3651524)
Genome browser
AA seq
415 aa
AA seq
DB search
METLKKQDEKVYEAIKLELGRQRDKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRY
YGGCEYVDIVEDIARDRAKEIFGAEYVNVQPHSGAQANMAVYFTILEQGDTVLGMNLSHG
GHLTHGSPVNFSGVQYNFVEYGVDEETQRVDYDVVRELAKEHKPKLIVAGASAYPRELDF
EKFREIADEVGAYLMVDMAHIAGLVATGLHPNPVPHAHFVTTTTHKTLRGPRGGMILCKE
EFGKKIDKSIFPGIQGGPLMHVISAKAVAFGEALSPDFKQYGEAVIANAKRLGEKLVSEG
VNLVSGGTDNHLLLLDLRSLNLTGKVAEKALDEVGITTNKNTIPFDPESPFVTSGIRIGT
AAVTSRGLDLEAMDEIGALIALTLKNVENEDKLNEVRERVAALTAKFPMYPELKM
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggagacattaaagaagcaagacgaaaaagtatatgaggcgattaagttagaattaggt
cgtcaacgtgacaaaattgaattaattgcatctgagaattttgttagtgaagctgtaatg
gaagctcaaggctcagtgctaacaaacaaatatgcagaaggctacccaggccgccgctat
tatggtggttgtgagtatgttgatattgtagaagatatcgcgcgtgatcgtgcaaaagag
atctttggtgcagaatatgtaaacgtgcagcctcactcaggtgcacaagcgaacatggct
gtatacttcacaatcttagaacaaggcgatacagtacttggtatgaacctttcacacggc
ggccacttaacgcacggaagcccagttaacttcagtggagttcaatacaactttgttgag
tacggtgttgatgaggaaactcagcgtgttgattatgatgtggtacgtgaactagctaaa
gaacataagccgaaattaatcgttgcgggtgcaagtgcataccctcgtgagcttgatttt
gagaaattccgcgaaatcgctgatgaagtaggcgcttatctaatggtggatatggctcat
attgcaggtcttgttgcaacaggcttacatccaaacccagttcctcacgctcattttgta
acgacaacaacacataaaacattacgcggacctcgcggcggaatgattctttgtaaagaa
gagttcggtaaaaagattgataaatcaatcttccctggaattcaaggcggcccgcttatg
cacgttatttctgcaaaagcagtagcatttggggaagccctatctccagatttcaaacaa
tacggcgaggcagttattgctaatgcaaaacgtctaggcgaaaagcttgtttcagaaggt
gtcaaccttgtttcaggcggaacggataatcacttactgcttcttgacttgcgttcatta
aacctaactggaaaagtggcagaaaaagcactagatgaagtagggattacaacgaataaa
aataccattccatttgaccctgaaagcccgtttgtaacaagtggtatccgtatcggaaca
gctgctgtaacatcacgcggtcttgatttagaggcaatggatgaaattggtgcattaatt
gcattaacgcttaaaaatgttgagaacgaagacaagcttaacgaagttcgtgagcgtgtg
gcagctcttacggctaaattcccgatgtaccctgagcttaaaatgtaa
DBGET
integrated database retrieval system