Alkalihalophilus pseudofirmus: BpOF4_07030
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Entry
BpOF4_07030 CDS
T01165
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
bpf
Alkalihalophilus pseudofirmus
Pathway
bpf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BpOF4_07030 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpf03021
]
BpOF4_07030 (rpoE)
03400 DNA repair and recombination proteins [BR:
bpf03400
]
BpOF4_07030 (rpoE)
Transcription machinery [BR:
bpf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BpOF4_07030 (rpoE)
DNA repair and recombination proteins [BR:
bpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BpOF4_07030 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
ADC49464
UniProt:
D3FPQ4
LinkDB
All DBs
Position
complement(3674651..3675154)
Genome browser
AA seq
167 aa
AA seq
DB search
MNLREMEKEEIQELSMVEVAYALMKEKRQPYYFTDLVKEISEIKGMKKAEVNQRMSFLYT
DLNIDGRFLTLGDNNWGLKSWYPHEQSEEEITSPVNPRKKAKSDDEDLDDDLEVFDDEFE
DLEDELDEISNEEDADDDDEEDADFTDKEDLDTDFDDDEEVEEDEER
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
ttgaacctacgcgagatggaaaaggaagagatccaagagctgtcaatggttgaagtcgct
tatgctttaatgaaagaaaagcgccagccttattatttcactgatttagttaaagagatt
tcagaaattaagggaatgaaaaaagctgaagtgaatcagcgtatgtcatttttgtatacg
gatttaaacatcgatggccgctttttaacgcttggtgataacaactggggccttaaaagc
tggtaccctcatgagcaatcagaagaagagattacttcaccagttaatcctcgtaaaaaa
gcaaagagtgacgatgaggatttagacgatgatctagaagtttttgacgatgagtttgaa
gacttagaggacgagctagatgagatctctaatgaagaagatgcagatgatgacgatgaa
gaagatgctgacttcactgacaaagaagatctcgatacggactttgatgatgatgaagag
gtagaagaggacgaagaacgttaa
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