Alkalihalophilus pseudofirmus: BpOF4_07280
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Entry
BpOF4_07280 CDS
T01165
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bpf
Alkalihalophilus pseudofirmus
Pathway
bpf03030
DNA replication
bpf03430
Mismatch repair
bpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BpOF4_07280
03430 Mismatch repair
BpOF4_07280
03440 Homologous recombination
BpOF4_07280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpf03032
]
BpOF4_07280
03400 DNA repair and recombination proteins [BR:
bpf03400
]
BpOF4_07280
Enzymes [BR:
bpf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BpOF4_07280
DNA replication proteins [BR:
bpf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BpOF4_07280
DNA repair and recombination proteins [BR:
bpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BpOF4_07280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ADC49514
UniProt:
D3FPV4
LinkDB
All DBs
Position
complement(3724304..3725041)
Genome browser
AA seq
245 aa
AA seq
DB search
MVMNHMVQLVKQLSTKLSPSMYASTLQSSQAEGLARLRQIQRELKNDDVLDQPLHSLSFI
VFDLETSGFFPDKGDEILSIGAVKMKGAEVLFEESFYSTVQCKKEPSSDVLSLTGLTLEE
LQSSRPLIEVLNDFYEFVGGGTLVAHHATHEKRFMSHMTWQLMRMPFAHRIIDTTFLTRV
VAHDENLVTLDECCIYYNIPITTRHHALYDAKMTAELWGQSLKLAQEKGFSTLREIYIYL
ATLKK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgaaccatatggtgcaattggttaaacagctatcgactaaattaagtcctagt
atgtatgcttctaccttgcaaagctcacaagctgaaggcttagcaaggctgaggcagatt
caaagagaattaaaaaatgatgacgtactcgatcagcctcttcattccctttcttttata
gtttttgatttagaaacaagcggcttctttcccgacaaaggcgacgaaatactctcaata
ggggccgtgaagatgaaaggagctgaggtgcttttcgaagagagcttttattctacagtg
caatgtaagaaagaaccgtcttcagatgtattgtcgcttacaggtcttacgttagaagag
ctccaatcttcaaggccattaatagaggtattaaatgatttttatgaatttgtcggaggg
gggaccttagttgctcatcatgctactcatgaaaaacgttttatgtcccacatgacgtgg
cagttaatgaggatgccgtttgcccaccgaattattgatacaactttccttacaagggtg
gttgctcacgatgaaaatcttgtaaccttagatgaatgctgcatctactacaatatccct
atcacaacgaggcatcatgccctctatgatgcgaaaatgacagctgaactttgggggcag
tccttaaagcttgcacaagagaaaggattttcgacgttacgcgagatttatatttattta
gcaacattaaaaaaatag
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