Alkalihalophilus pseudofirmus: BpOF4_07325
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Entry
BpOF4_07325 CDS
T01165
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpf
Alkalihalophilus pseudofirmus
Pathway
bpf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BpOF4_07325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpf03400
]
BpOF4_07325
Enzymes [BR:
bpf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BpOF4_07325
DNA repair and recombination proteins [BR:
bpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BpOF4_07325
Prokaryotic type
BpOF4_07325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADC49523
UniProt:
D3FPW3
LinkDB
All DBs
Position
complement(3732201..3732875)
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AA seq
224 aa
AA seq
DB search
MSILKNDWNELLKDQFEQPYYKELREFLKKEYQEEIVYPSMHHLFEALQLTSYRDTKVVI
LGQDPYHGPNQAHGLSFSVRPDVRIPPSLQNMFKELKEDLGASVPNNGYLVPWAEQGVLL
LNTVLSVRGGQAASHKGRGWELFTDRVIDLLNEREKPVIFVLWGKHAEAKSKRITNDHHY
IITAPHPSPLSAHRGFFGSRPFSKINRILTEMGEEPIEWQLPNR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcttaaagaatgattggaacgaactgcttaaagatcagtttgagcagccttat
tataaagagctccgcgaatttttaaaaaaggaataccaagaggaaattgtttatccctca
atgcaccacctttttgaagcccttcaattaacatcttaccgtgatacaaaagtggtcatt
cttggacaggatccctaccacggacctaatcaagcacatggactaagcttttcagtgagg
cctgatgtgcgcatcccgccatctcttcaaaatatgtttaaagaattaaaagaagatctc
ggcgcttcggttcctaataacggatatcttgttccctgggcagagcaaggtgttctttta
ttaaataccgttctatcggtaaggggaggacaagcagcttcacataaaggtcgcggctgg
gagctttttaccgatcgggtgattgaccttctgaatgaaagagaaaagcctgtcattttt
gtgctttggggtaagcatgcagaagcaaaaagcaagcgaattacaaatgaccatcattat
atcattacagctccgcatccgagtcccctgtcagctcatcgtggattttttggaagcaga
ccattttcaaaaatcaataggatattaacagaaatgggcgaggaaccaatcgaatggcag
ctccccaatcgttaa
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