Alkalihalophilus pseudofirmus: BpOF4_08405
Help
Entry
BpOF4_08405 CDS
T01165
Symbol
clpC
Name
(GenBank) class III stress response-related ATPase
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
bpf
Alkalihalophilus pseudofirmus
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bpf03110
]
BpOF4_08405 (clpC)
Chaperones and folding catalysts [BR:
bpf03110
]
Heat shock proteins
HSP100
BpOF4_08405 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_22
AAA_16
nSTAND3
UVR
AAA_18
IstB_IS21
RuvB_N
Mg_chelatase
TniB
AAA_14
ATPase_2
Zeta_toxin
AAA_7
NACHT
AAA_28
AAA_3
DNA_pol3_delta2
AAA_24
AAA_25
Flg_hook
NBD_SMAX1
DUF6933
DUF3335
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ADC49739
UniProt:
D3FR43
LinkDB
All DBs
Position
105014..107455
Genome browser
AA seq
813 aa
AA seq
DB search
MMFGRLTERAQKVLALAQEEAIRLGHNNIGTEHVLLGLIREGEGIAAKALQALGLGSEKI
QKEVETLIGKGQEGSKTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVA
ARVLNNLGVSLNKARQQVLQLLGSNEVGSSSQQGGSATHANTPTLDSLARDLTAIAREES
LDPVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVANEVPETLRNKR
VMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASN
ILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVNEPTLEESILILKGLRDRY
EAHHRVTITDEAIEESVKMSDRYISDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEG
RLEETRKEKDAAVQSQEFEKAASLRDTEQRLREELEEMKNEWKKKQGQEDTEVVVEDIAQ
VVASWTGIPVSKLAEEETERLLKMEKILHERVVGQEEAVISISKAVRRARAGLKDPKRPI
GSFIFLGPTGVGKTELARAVAETLFGDEDAVIRIDMSEYMEKHATSRLVGSPPGYVGHED
GGQLTEKVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAIIMTS
NVGASTLKRNKYLGFTTESEGQEYKDMKGKVMAELKRSFRPEFLNRIDEIIVFHSLEKKH
VREIITLMADQLKQRLKEQGIDFELTEAAKDKITDLGYDPEYGARPLRRALQKQVEDRLS
EELLKGTIFKGQKAIIDVKDDELVVETRESAQV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttggacgtttaacagaacgagctcagaaggtattagcattagcacaagaggaa
gccattcgattaggtcataataatattggtacagagcatgtactgctcggtctgatcaga
gaaggagaaggaattgctgctaaagcgttgcaagcccttggattaggttcagaaaaaatc
caaaaagaagtagagacattaatcggaaaaggccaagaagggtctaaaacgattcattat
acaccccgtgccaaaaaggtaattgagctttctatggatgaagcgagaaagcttggacac
tcttatgtcggtacagaacatatccttttagggttaattagagaaggagagggtgttgca
gcaagagtattaaataatcttggtgtaagcctcaataaagcacgtcagcaagtactgcag
ttactaggcagcaatgaggttggcagctcttcacaacaaggaggaagtgctactcatgca
aacacgccgacacttgacagcttagctcgagacttaactgctattgcccgtgaagagtca
cttgaccctgttattggacgaagtaaagagattgagcgtgtaatccaagtacttagtcgt
cgtacaaaaaacaaccctgttttaatcggggagcctggtgttggtaaaacggcgattgct
gaagggttggcacaagctattgttgcaaatgaagttcctgaaacacttcgcaacaaacgt
gtgatgacactcgatatgggtacggtagtagctggtacaaaatatcgtggtgaattcgaa
gaccgcttaaagaaagtgatggatgagattcgtcaagcgggcaatgtcattttattcatt
gatgagctgcacacattaattggagcaggtggagcagaaggtgccattgatgcttctaat
atcttaaagccttcactagcacgtggagaacttcaatgtatcggtgcgacaactcttgat
gaataccgtaagtatattgaaaaagatgcagcgcttgagcgtcgtttccagccaattcaa
gtaaatgagccgacgctagaggagtcgatcttaatcttaaaaggtctccgtgatcgttat
gaagcacatcaccgtgtaacaattacagatgaggcgattgaagagtctgttaaaatgtca
gatcgctacatttcagatcgtttcttacctgacaaagccattgatttaattgacgaggct
gcatcaaaagtgagactgcgttcttacacagcacctccaaacttaaaagagcttgaaggc
cgtcttgaggaaacgcgtaaagaaaaagatgctgccgttcaaagccaagaatttgaaaaa
gcggcttctcttcgtgacactgaacagcgtctgcgtgaagagcttgaagaaatgaagaac
gagtggaagaaaaagcaagggcaagaggataccgaagttgtcgttgaagatattgcccaa
gtcgttgctagctggactggaattcctgtatcaaagctagctgaggaagaaacagaaaga
ttgcttaagatggagaaaattcttcatgagcgtgtagtaggccaagaagaagcggttata
tctatttctaaagcagtaaggcgtgctcgtgcaggcttaaaggaccctaaacgtccaatt
ggttcatttatattcctagggccgactggtgttggtaaaacagaattggcacgtgcagta
gccgagacattatttggagatgaagatgcagttattcgtatcgacatgtctgagtatatg
gaaaagcacgcaacaagccgtttagtaggttctcctccgggatatgtaggacatgaggac
ggcggacagttaacagagaaagttcgtcgcaagccgtactctgtaattcttttagatgaa
attgaaaaagctcatccggaagtatttaatattttattgcaagtgcttgaggatggacga
ttaacagattctaaaggccgtacggtagacttccgcaatacagcaatcatcatgacatcc
aacgttggtgctagtacgttaaaacgtaataagtatcttgggtttacaacggaaagtgaa
gggcaagagtataaagatatgaaaggaaaggtgatggctgagcttaaacgaagcttccgt
cctgaattccttaaccgtatcgatgaaattattgtcttccattcactagagaaaaagcat
gtgcgtgaaattatcacattaatggcagatcaattaaagcagcgcttgaaagagcagggc
attgattttgaacttactgaggctgcaaaagataagattactgaccttggttatgatccc
gagtacggtgcgcgtccattacgccgtgcgcttcaaaagcaagtagaagaccgtctctca
gaagaacttcttaaaggaacgatcttcaaagggcagaaggcgatcattgatgtaaaagat
gatgagcttgttgtagaaacgcgtgaaagtgcgcaagtataa
DBGET
integrated database retrieval system
