Alkalihalophilus pseudofirmus: BpOF4_08410
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Entry
BpOF4_08410 CDS
T01165
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bpf
Alkalihalophilus pseudofirmus
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpf03400
]
BpOF4_08410 (radA)
DNA repair and recombination proteins [BR:
bpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BpOF4_08410 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
Rad51
AAA_14
AAA_24
nSTAND3
AAA_16
AAA_5
KTI12
ABC_tran
NACHT
RecA
Elong_Iki1
SLFN-g3_helicase
AAA_30
NTPase_1
ATPase_2
DUF7125
AAA_31
DAP3
CbiA
NPHP3_N
divDNAB
AAA
ArsA_ATPase
AAA_18
DUF7129
HypA
Motif
Other DBs
NCBI-ProteinID:
ADC49740
UniProt:
D3FR44
LinkDB
All DBs
Position
107605..108981
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AA seq
458 aa
AA seq
DB search
MAKKKTKFVCQECGYESAKWMGKCPGCQGWNTMVEEFEPSAKQSSRSYVTSGAAQGTKPQ
AITTIVSETEARMSTTMVELNRVLGGGIVPGSLVLVGGDPGIGKSTLLLQLSAKLAATNE
KVLYISGEESVKQTKLRADRLNVSSSNLYVLAETDLSFIERAIDQVEPALVIIDSIQTVY
QDEIASAPGSVAQVRECTAAFMKIAKTRGIAIFIVGHVTKQGSIAGPKLLEHMVDSVLYF
EGERHHTYRILRAVKNRFGSTNEMGIFEMKELGLEEVLNPSEIFLEERSKGAAGSIVVAS
MEGTRPVLVELQALISPTSFGNPRRMATGIDHNRVSLLMAVLEKRVGLLLQNQDAYLNVA
GGVRLDEPAIDLAIALSIASSFRNQVTSPTDVAIGEIGLTGEIRRVSRIEQRVNEAAKLG
FKRAIIPEKNLGGWSVPKEIQVVGVPTLERALEVALGR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaaaaacaaagttcgtttgtcaggaatgcggctatgaatcagccaagtgg
atggggaaatgtcctggatgtcaaggctggaacaccatggtcgaagagtttgaaccaagt
gccaaacaatctagtcggagttatgtcacttcaggggcagcccaaggcacgaaaccgcaa
gcgatcacaaccatcgttagtgaaacagaagctagaatgagcacgacgatggtcgagtta
aatcgtgtactcggcggagggattgtacctggctctcttgtattagtaggcggtgacccc
ggaataggcaagtctactttattactccaattatcagcgaagctcgctgctacaaatgaa
aaagtcctctatatctctggtgaggaatctgtaaagcagaccaaactgcgggctgatcgg
ttaaatgtatcgtcatctaacctttatgtattagctgaaacggatcttagctttattgaa
cgagctattgatcaagtcgaacccgccctcgtcattatcgattccattcaaaccgtttac
caagatgagattgcctctgcaccaggaagtgtggcacaagtaagagaatgtactgcagcc
tttatgaaaatagccaagacacgcgggattgcgatctttatcgtaggtcatgtgaccaaa
cagggttctatagctggaccgaagcttcttgaacatatggtcgattccgttttatatttc
gaaggcgagcgtcatcatacatatcgaattcttcgtgctgtgaaaaatcgtttcggttcg
acgaatgagatggggatctttgaaatgaaggaattaggattagaagaagtgttgaatcct
tctgagatattcttagaggaacgctcaaaaggagcagcaggatcgatcgttgtcgcatca
atggaaggtacgaggcctgtattagtcgaactgcaagcacttatttctccaaccagtttt
gggaatcctagacgaatggcaacaggaattgatcataaccgtgtatcactgttaatggct
gttttagaaaagcgtgtaggtctcttgctgcagaatcaagatgcctaccttaatgtggca
ggcggtgttcgcttagatgaacctgctattgatttagcgattgcattaagtatcgcatct
agcttccgtaaccaagtgacaagcccaacagatgtggcgatcggagagattggattaacc
ggcgaaatacgtagggtgtcacggattgaacagcgtgtgaatgaggcagctaaattaggg
tttaagcgtgctattatacctgagaagaatcttggaggctggagtgttccaaaagagatt
caagtagtaggcgtaccaacgttagagcgtgcgcttgaggtagctttagggaggtaa
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