Alkalihalophilus pseudofirmus: BpOF4_09205
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Entry
BpOF4_09205 CDS
T01165
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
bpf
Alkalihalophilus pseudofirmus
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpf03021
]
BpOF4_09205 (sigB)
Transcription machinery [BR:
bpf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BpOF4_09205 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_28
DUF134
GerE
HTH_3
HTH_16
HTH_37
DUF1492
NirdL-like_HTH
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
ADC49897
UniProt:
D3FRY7
LinkDB
All DBs
Position
251043..251828
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AA seq
261 aa
AA seq
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MSTESLPHKQNKDEVYEWIRLYQETGEEEVQVKLVKHYEALVRSLARKFSKGREYDEDLY
QVGMVGLLAALTRFDSEFGRSFESFAVPTIVGEIKRFIRDKTWSVHVPRRIKELGPKIKK
AVESLTVELNRSPLVHEIAAYLEVSEEEVLETMEMSKSYQALSVDRSLEADQEGGEVTLL
DLVGNEDSGFEKTDQKMLLQKAFQVLNEREKQILMLTYYDNLSQKETGEKLGISQMHVSR
LQRRALQKLRDSIKVEPSEIL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggagtcccttccacacaaacagaacaaagatgaggtatatgaatggattcgc
ctttatcaggaaacaggcgaagaagaggttcaagtaaagctggttaaacattatgaggct
cttgtccgttcattagctcggaagttttctaaaggacgggaatacgacgaagatctatac
caagttggaatggtaggtctgctcgctgccctaactcgatttgacagtgagtttggacgt
agttttgaatcttttgccgtaccaactattgtcggtgagatcaaacgattcatacgtgat
aaaacgtggagcgtccatgttccaagacgtattaaagagttaggtcctaaaatcaaaaag
gctgtagaatccttgacggttgaacttaaccgctctccacttgttcatgaaattgctgcg
tatctagaggtctctgaagaggaagttctagagacaatggagatgagcaaaagttatcaa
gcgttatctgttgaccgttcgcttgaggctgaccaagaaggtggagaagttacattgctt
gaccttgtcggcaatgaagacagcgggtttgagaaaactgatcaaaagatgctgcttcaa
aaagcattccaagtgcttaatgaacgtgaaaaacaaattcttatgctaacctactatgac
aatttgagccaaaaagaaacaggggaaaaactcggtatttctcaaatgcatgtatcacgc
cttcaacgtagggcgttacaaaaattacgagattcaattaaagtcgagccttcggagatt
ttataa
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