Alkalihalophilus pseudofirmus: BpOF4_09360
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Entry
BpOF4_09360 CDS
T01165
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bpf
Alkalihalophilus pseudofirmus
Pathway
bpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BpOF4_09360 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpf03019
]
BpOF4_09360 (groEL)
03110 Chaperones and folding catalysts [BR:
bpf03110
]
BpOF4_09360 (groEL)
03029 Mitochondrial biogenesis [BR:
bpf03029
]
BpOF4_09360 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpf04147
]
BpOF4_09360 (groEL)
Enzymes [BR:
bpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BpOF4_09360 (groEL)
Messenger RNA biogenesis [BR:
bpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BpOF4_09360 (groEL)
Chaperones and folding catalysts [BR:
bpf03110
]
Heat shock proteins
HSP60 / Chaperonin
BpOF4_09360 (groEL)
Mitochondrial biogenesis [BR:
bpf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BpOF4_09360 (groEL)
Exosome [BR:
bpf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BpOF4_09360 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
BpOF4_09360 (groEL)
Exosomal proteins of breast cancer cells
BpOF4_09360 (groEL)
Exosomal proteins of colorectal cancer cells
BpOF4_09360 (groEL)
Exosomal proteins of bladder cancer cells
BpOF4_09360 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
ADC49927
UniProt:
D3FSF9
LinkDB
All DBs
Position
286039..287679
Genome browser
AA seq
546 aa
AA seq
DB search
MAKDIKFSEEARRSMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLKNVTSGANPMVIRKGIE
KATAAAVTELKNIAKPIEGKESIAQVAAISSADEEVGQIIAEAMERVGNDGVITIEESKG
FSTELEVVEGMQFDRGYASPYMVTDSDKMEAVLDNPYVLITDKKISNIQEVLPVLEQVVQ
QGKPILIIAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIATLTGGEVIT
EDLGLDLKSANITQLGRAGKVVVTKENTTIVEGAGEADQIAARVNQIKGQLEETTSDFDK
EKLQERLAKLAGGVAVLKVGAATETEMKERKLRIEDALNSTRAAVEEGIVAGGGTALINV
IKAVEAVSADGDEATGVNIVLRALEEPVRQIAHNAGLEGSVIVERLKSQEVGFGFNAATG
EWVNMVETGIVDPTKVTRSALQHAASVSAMFLTTEAVIADKPEENEGGGMPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggatattaaatttagcgaagaagcacgtcgttcgatgctgcgcggtgtagat
gcacttgcaaatgcagtaaaagtaacgcttggaccaaaaggtcgtaatgttgttttagaa
aagaagtttggttctccgttaatcacaaacgatggtgtaacgattgcaaaggaaatcgaa
cttgaagatgcattcgagaacatgggtgctaaacttgttgctgaagtagcaagcaaaaca
aacgacatcgctggtgacggtacaacaactgcaacagtacttgcacaagctatgattcgt
gaaggacttaaaaacgtaacatctggtgcaaacccgatggttatccgtaaaggaatcgaa
aaagcaacagctgctgctgtgacagagcttaaaaacatcgctaaaccaatcgaaggtaaa
gagtctattgcacaagttgctgcaatctcttctgctgatgaggaagttggccaaatcatt
gctgaggcaatggagcgcgttggcaacgacggcgttatcacaatcgaagaatctaaaggt
ttctctactgagctagaggtggtagaaggtatgcaattcgaccgcggatatgcttcacct
tacatggtaactgattctgacaaaatggaagcagttctagataacccttacgttctaatt
acagacaagaagatctcgaacattcaagaggtacttcctgttcttgagcaagttgtacaa
caaggcaagccgatccttattatcgctgaagatgttgaaggtgaagctcttgctacacta
gttgtgaacaaacttcgcggaacatttaatgcagtagctgttaaagctcctggattcggt
gaccgtcgtaaagctatgcttgaagacatcgctacattaacaggcggagaagtgatcaca
gaagatctagggcttgacctcaagtctgctaacatcactcaacttggccgtgctggtaaa
gtagttgtaacaaaagaaaacacaacaatcgttgaaggtgcaggcgaagcagatcaaatc
gcagctcgcgtaaaccaaatcaaaggtcaattagaagaaacaacttctgatttcgacaaa
gaaaagcttcaagagcgtcttgctaaattagctggcggtgtagctgttcttaaagttggt
gctgcaacagaaactgaaatgaaagagcgcaaacttcgcattgaagatgctcttaactca
actcgtgcagcagttgaagaaggtatcgtagctggtggtggtacagcacttatcaatgta
attaaagcagttgaagctgtatctgctgatggagacgaagcaactggtgtgaacatcgta
cttcgtgctctagaagagccagttcgtcaaattgcacacaatgcaggtcttgaaggttct
gttattgttgagcgtcttaagtcacaagaagttggctttggattcaacgcagctactggc
gagtgggtaaacatggttgaaacaggtatcgttgacccaacaaaagtaacgcgttcagct
ctacaacacgctgcatcagtatcagctatgttcttaacaacagaagctgtaatcgctgat
aagcctgaggaaaacgaaggcggcggcatgcctgacatgggcggcatgggcggcatgggt
ggaatgggcggcatgatgtaa
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