Alkalihalophilus pseudofirmus: BpOF4_09855
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Entry
BpOF4_09855 CDS
T01165
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpf
Alkalihalophilus pseudofirmus
Pathway
bpf03420
Nucleotide excision repair
bpf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BpOF4_09855 (pcrA)
03430 Mismatch repair
BpOF4_09855 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpf03400
]
BpOF4_09855 (pcrA)
Enzymes [BR:
bpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BpOF4_09855 (pcrA)
DNA repair and recombination proteins [BR:
bpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BpOF4_09855 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
BpOF4_09855 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
ResIII
AAA_11
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ADC50026
UniProt:
D3FTF3
LinkDB
All DBs
Position
391947..394175
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AA seq
742 aa
AA seq
DB search
MQEKIIEKMLSGLNPEQRQATTHTEGPLLLMAGAGSGKTRVLTHRIAYLLREKAIAPWNV
LAITFTNKAAREMKDRVAKLVGPVAEDIWISTFHSMCVRILRRDIDRIGYNRNFTILDSS
DQLSVIKQILKNKNIDPKKFDPRSILGTMSGWKNELKKPDDCMRQATGPYDQTAAEVYVE
YQKQLKKNHALDFDDLIMKTIELFKLVPEVLEFYQRKFQYILVDEYQDTNKAQYMLVRML
SDKYENICVVGDSDQSIYRWRGADIANILSFEEDYPNATVILLEQNYRSTKMILNAANKV
IENNFNRKPKNLWTENDDGPKIGYYGADTEQSEAQFVVEKIREATRSGEHTNSDIAILYR
TNAQSRVIEEYFVKSNIEYNIVGGTKFYDRKEIKDVLAYLRLIANPDDDISLQRIINVPK
RGIGATTVDKIGAYAVEQGLSLFAALQEIEQVGLTARTVGKLKDFRDQLSHWIQMQEYLS
VTELVEELLEKTGYRDMLRNEQSIEAQSRLENIDEFITVTNEFEKSNDDKSLVAFLTDLA
LVADIDKLDDENEGKPKDAITLMTLHSAKGLEFPLVFLIGMEEGIFPHSRSLFEAEEMEE
ERRLAYVGITRAEKQLYITNARMRTLYGKTNTNPPSRFISEIPEECLEQVNEDKPTPAWM
KASRGTASAPAAKPKVRASVSTSTGGDQFAWAVGDKAEHKKWGVGTVVSIKGEGEAVELD
IAFPQPTGVKRLFAKFAPITKQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaagatcatagaaaaaatgctctcaggcttaaatcctgagcagagacaagca
acaactcatacggaaggtccgttattactaatggctggcgcgggaagtggaaagacacga
gttcttacccatcgcatcgcttatttgctgcgtgaaaaagccattgcgccgtggaacgta
ctagcgattacatttacaaataaagctgcacgagaaatgaaagatcgtgtggcaaaactt
gttggaccggtagctgaagatatttggatttctacctttcactcgatgtgtgtccgtatt
ttgcgtcgtgatattgaccgcatcggctacaaccgtaatttcacaattctagattcctca
gatcaattatctgttataaagcaaattctaaaaaacaagaacattgatcctaagaaattt
gatccaagaagcatccttggaacaatgagcggctggaaaaatgaattaaagaagcctgat
gactgcatgaggcaggcaacgggaccatatgatcaaacggcagctgaagtatatgtggag
taccaaaaacaattaaagaaaaatcacgccttagattttgatgatcttatcatgaagacg
atcgagctgttcaagcttgtaccagaggtattagaattctatcaacgcaagtttcagtac
atcctggtagatgagtatcaagatacgaataaagcacaatatatgcttgtccgaatgctt
agtgataaatatgaaaatatttgcgttgtcggggattctgatcagtcgatctatcgctgg
aggggtgcggatattgctaatatcttatcctttgaagaagattacccgaatgcgaccgtt
attttactagagcagaattaccgctccactaaaatgattttaaatgcagcaaacaaagta
attgagaacaactttaaccgtaaaccgaaaaacctatggacagaaaatgacgacggtcca
aagattggttactacggggcagatacggagcaatcggaagcacagtttgtggtcgagaaa
atccgtgaagcaacgagaagcggggagcacactaactcagatattgcgattctctaccgt
acaaatgctcagtcacgtgtaattgaggaatattttgtgaagtctaatattgagtacaac
atcgtcggcggcactaagttctatgatcgtaaagaaattaaagatgttcttgcgtatctg
cgtcttattgccaaccctgacgatgatatcagcttgcagcggattattaacgttccaaaa
cgaggcataggtgcgacaactgttgataaaattggagcgtatgctgttgaacaaggcctt
tctctatttgctgctttgcaggaaattgagcaggtaggcctgacagcacgtacggtcggc
aaattaaaagactttagagatcaactttctcactggattcaaatgcaggagtatttatct
gtgactgagttagtcgaggaactgctagagaagacaggctaccgtgatatgctccgcaac
gaacaatcgatcgaggcacagagccgtcttgagaatattgatgagtttataacggttacg
aatgaatttgaaaaatcaaatgatgataaatcattagtagcattcttaacagatcttgcg
cttgtcgcagatattgacaagcttgacgatgaaaatgaaggaaaacctaaggatgcgatc
acgcttatgactctgcattccgcaaaggggctggaattcccgctagtattcttgattggt
atggaagaagggatcttcccgcatagccgctcgctttttgaggcagaagaaatggaagaa
gagcgccgccttgcctatgtagggattacgagagctgaaaagcagctttatataacgaat
gcaaggatgcggaccttatatggtaagacaaatacaaacccgccgtctcgttttatttca
gagattccagaagagtgtcttgaacaagtgaacgaggataaaccaacaccggcttggatg
aaagcgtcacgtggtacagcctctgctccagcagcaaaacctaaagtgcgtgcatctgta
tcgacttcaacgggcggtgatcaatttgcttgggctgttggagataaagcagagcacaaa
aaatggggagtagggaccgttgtcagcatcaaaggtgaaggcgaagctgttgagcttgat
attgctttccctcagcctactggcgtgaagcgtttatttgctaagtttgccccaattact
aagcaatag
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