Alkalihalophilus pseudofirmus: BpOF4_11780
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Entry
BpOF4_11780 CDS
T01165
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
bpf
Alkalihalophilus pseudofirmus
Pathway
bpf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BpOF4_11780 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bpf01007
]
BpOF4_11780 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpf03016
]
BpOF4_11780 (aspS)
03029 Mitochondrial biogenesis [BR:
bpf03029
]
BpOF4_11780 (aspS)
Enzymes [BR:
bpf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
BpOF4_11780 (aspS)
Amino acid related enzymes [BR:
bpf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
BpOF4_11780 (aspS)
Transfer RNA biogenesis [BR:
bpf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
BpOF4_11780 (aspS)
Prokaryotic type
Other AARSs
BpOF4_11780 (aspS)
Mitochondrial biogenesis [BR:
bpf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
BpOF4_11780 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
HisZ-like
Motif
Other DBs
NCBI-ProteinID:
ADC50409
UniProt:
D3FVX7
LinkDB
All DBs
Position
793586..795373
Genome browser
AA seq
595 aa
AA seq
DB search
MIGRTHHCGELRSEHVGETVQLKGWVQKRRDLGNVIFLDLRDRSGIVQVVFSPEVNKEAL
ETAERVRNEYVLEVEGTVVARDARTVNDKIETGTIEIHVTKVEVLNASKSLPFQIEADTD
ASEDVRLRYRYLDLRRPDMQETFKLRHKTTKLIRNFLDEEAFLEIETPMLTKSTPEGARD
YLVPSRVHHGEFYALPQSPQIFKQLLMVSGFERYYQVVRCFRDEDLRADRQPEFTQIDIE
TSFMDKEDLLSMTEKMMAKVLKETKGVEVSLPMPRLTYDEAMNRYGSDKPDTRFEMELIE
LSDVVRDSSFKVFTSAINGGGIVKGLNLKGGASKMSRKEIDALTEFVKPYGAKGLAWLKV
EADGLKGPIAKFFEGEHAENLLSAMNGEEGDLLFFAADKAQVVFDSLGALRLKFGKEFDL
IDKDAFNFLWVVDFPLVEYDEDAKRYVALHHPFTSPKKADRDLLATDPASVRAEAYDLVL
NGYELGGGSQRIYEREIQEHMFRALGFSEEEAKEQFGFLLEAFEYGTPPHGGIALGLDRL
IMLLAGRTNLRDTIAFPKTASASCLLTNAPSEVSLDQLIDLNLSIIGNKTDKVEV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgataggtagaacgcatcattgtggagagttaagaagtgaacatgtaggggagaccgta
caattaaaagggtgggtgcaaaagcgccgtgatttaggaaatgttattttccttgatttg
cgagaccgctcaggcattgtacaagttgtttttagcccagaggttaataaagaagcactt
gagacagcagaacgtgttcgtaatgaatacgtacttgaagtagaaggtacagtcgttgcg
cgtgacgcgcgtacagtaaatgacaagattgagacagggacgatcgaaattcatgtaaca
aaagtagaagtactcaatgcttcaaaatcacttccattccaaatcgaagctgatacagat
gcatcagaggatgtgcgtctgcgttaccgttacttagatttacgccgtcctgatatgcag
gaaacatttaaactacgccacaaaacaacaaagttaattcgtaatttcttagacgaagaa
gcatttcttgaaattgaaacaccaatgcttacaaagagtacacctgaaggagctcgtgac
tatcttgttccaagccgcgtgcaccatggtgaattttatgctcttccgcagtcgccgcaa
atcttcaagcagcttttaatggtgtctggttttgaacgttactaccaagtggttcgctgt
ttccgtgatgaagatctacgtgcagaccgtcagccagaattcacccaaattgatattgag
acttcttttatggataaagaagaccttctttcaatgacagagaaaatgatggcaaaagtt
ttaaaggaaacaaaaggtgtagaagtttcccttccaatgcctcgtctgacgtatgatgaa
gcaatgaaccgttatggctctgataagccggatacacggtttgaaatggagttaattgag
ctctcagatgtagtccgtgactcaagctttaaagtatttacaagtgcgattaacggcggc
ggtattgtgaaaggcttaaatcttaaaggcggggcaagtaaaatgtctcgtaaggaaatt
gacgcgttaactgaatttgttaagccgtatggtgcaaaaggtcttgcttggctgaaggtt
gaagcagatggcttaaaaggcccgattgctaaattctttgaaggggaacatgcagagaac
cttctaagtgcgatgaatggggaagaaggcgatttattattctttgcagcagacaaagcg
caagttgtctttgacagccttggtgcacttcgtctgaagttcggtaaagagttcgactta
attgataaagatgcatttaatttcttatgggttgttgacttcccgctcgttgaatatgat
gaggatgcaaagcgttatgtcgctcttcaccacccgttcacaagtcctaagaaagcagat
cgtgacctgcttgctacagatcctgcatctgttcgtgccgaggcttatgaccttgtatta
aatggttatgaacttggcggcggttcacagcgtatttatgagcgtgaaattcaagagcat
atgtttagagcgctagggttctcagaagaagaagcaaaagaacaattcggcttcttactt
gaagcatttgaatatggtacaccaccgcacgggggaatcgctcttggacttgaccgtcta
atcatgcttctagcagggcgtacaaacttacgtgatacgattgcgttccctaaaacagca
agtgcaagctgcttattaactaatgcaccaagcgaagtaagtcttgatcagttaattgac
cttaatttatccatcatcggtaataagacggataaggtcgaagtataa
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