Alkalihalophilus pseudofirmus: BpOF4_13375
Help
Entry
BpOF4_13375 CDS
T01165
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
bpf
Alkalihalophilus pseudofirmus
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpf03016
]
BpOF4_13375
Enzymes [BR:
bpf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
BpOF4_13375
Transfer RNA biogenesis [BR:
bpf03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
BpOF4_13375
Prokaryotic type
Methylthiotransferases
BpOF4_13375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ADC50726
UniProt:
D3FXL5
LinkDB
All DBs
Position
1099421..1100770
Genome browser
AA seq
449 aa
AA seq
DB search
MPTVAFHTLGCKVNHYETEAIWQLFKQEGYEKVEYEQTSDVYVINTCTVTNTGDKKSRQV
IRRAIRKNPDAVICVTGCYAQTSPAEIMAIPGVDIVVGTQDRTKMIGYIEQFKKEREPIN
GVGNIMKSRVYEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKDVIKQ
ATQLVEAGYKEIVLTGIHTGGYGEDLKDYSLARLLEDLEQVDGLKRIRISSIEASQLTDE
VIEVIDRSEKVVRHLHIPLQSGSNTVLKRMRRKYTMEFFAERLDRLKEVLPGLAVTSDVI
VGFPGETEEEFQETFDFIAKHKFSELHVFPYSKRTGTPAARMDDQIDEEVKNERVHRLIE
LSNQLAKEYASQFEGEVLEVIPEERDKENPESGLYIGYTDNYLKVKVKATDEMIGKIVKV
KIAKAGYPYNKGEFVRVLDDAEIKQAVNG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtggcttttcatacattaggttgtaaagtaaatcattatgaaacagaagca
atttggcagctgtttaaacaagaaggttacgagaaagtagagtatgagcaaacatcagac
gtctacgttattaacacttgtactgtaaccaatacaggcgataaaaaaagccgtcaagtg
attcgtcgagcgattcgtaaaaatccagacgcggttatttgtgtaacaggttgttatgct
caaacctctccagctgaaattatggccattcctggggttgatattgtagtcgggactcaa
gaccgtacgaaaatgatcggctacattgagcagttcaaaaaagagcgtgagccgatcaat
ggggtaggaaacattatgaagtctcgtgtatatgaggaacttgatgtcccggcatttacc
gatcgtactcgtgcttctttaaaaatccaagagggctgtaacaatttctgtaccttctgt
atcatcccttgggcgcgcggtcttatgcgttcacgtgacccgaaagatgtgattaaacaa
gcaactcagcttgtagaagcaggatacaaagaaattgttctcactggaattcatacaggc
ggctatggcgaggatctaaaggattacagccttgctcgtctcctggaagatttagagcag
gtagatggcttaaaacgtattcgtatctcatcaattgaggctagtcaattaacagatgaa
gtgattgaggtgattgatcgctctgaaaaagtcgtacgtcacttacacattccgctacaa
tcaggttcaaatacagttcttaagcgtatgcgccgtaaatacacaatggaattctttgct
gaacgtcttgatcgtttgaaagaagtgcttccaggtcttgccgttacatcagatgtcatt
gttggtttccctggtgagacagaagaagaattccaagaaacatttgattttattgcaaag
cataaattcagtgagcttcatgtcttcccgtattcaaaacgtacagggacaccagcagcg
cgcatggatgaccaaattgatgaagaagtaaagaatgaacgtgtacaccgtttaattgaa
ctttccaatcaattagcaaaagaatatgcttctcaatttgaaggagaggttcttgaagtg
attccggaagaacgtgataaagagaatcctgagagcggtttgtatattggttataccgat
aattacctaaaagtaaaagtgaaagcaacggatgagatgatcggtaagatcgttaaagta
aaaattgcaaaagccggatacccttataacaaaggtgaatttgtccgcgtcttagatgat
gccgagataaagcaagcggtaaacggataa
DBGET
integrated database retrieval system
