Alkalihalophilus pseudofirmus: BpOF4_13530
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Entry
BpOF4_13530 CDS
T01165
Symbol
lcfB
Name
(GenBank) long-chain fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bpf
Alkalihalophilus pseudofirmus
Pathway
bpf00061
Fatty acid biosynthesis
bpf00071
Fatty acid degradation
bpf01100
Metabolic pathways
bpf01212
Fatty acid metabolism
bpf02024
Quorum sensing
bpf04146
Peroxisome
Module
bpf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BpOF4_13530 (lcfB)
00071 Fatty acid degradation
BpOF4_13530 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BpOF4_13530 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
BpOF4_13530 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bpf01004
]
BpOF4_13530 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpf04147
]
BpOF4_13530 (lcfB)
Enzymes [BR:
bpf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BpOF4_13530 (lcfB)
Lipid biosynthesis proteins [BR:
bpf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BpOF4_13530 (lcfB)
Exosome [BR:
bpf04147
]
Exosomal proteins
Exosomal proteins of breast milk
BpOF4_13530 (lcfB)
Exosomal proteins of breast cancer cells
BpOF4_13530 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ADC50757
UniProt:
D3FXZ8
LinkDB
All DBs
Position
1127411..1129054
Genome browser
AA seq
547 aa
AA seq
DB search
MDKRWLALYENNLEAKSTIEKRTLTDLLNDTANKHGTNTAITFYGKTWSYQELQKYSEAL
AGALHQDQFDKGDRLAIMLPNCPHYLFSLFGTFRAGGVVVQVNPMYVARELEYILNDSEA
THIVILSDLYPLFKSVRNKVPTKKAIVVALKPDAEVELEGDDILFDSYLKGASAPAPQHS
LDPEVDLAVLQYTGGTTGVSKGVMLTHMNLISNTEQTYDFMFSGDVSPPHNAKVVNVLPL
FHIFSLTCCNFVTIRHGGNQILIPRFDMPEVLETIKREKPFQFGGVPTMYVGFNQVGKYK
EFGLDLVESYVSGGSSLPVEALEAFEAGTGRKLCEGYGLSEAAPVTHFNPSFQERKAGSV
GIPLPNTDAKVVAETDAGWEEVGVGEVGEMIINGPQVMKGYWRKPEETKKTLRDGWLFTG
DLAKMDEEGYFSIVDRKKDMILASGYNVYPREIEEVLYGHSGVQEVIVLGLPDPYRGETV
KAYITPKPDSTLTSQEVIDFCRKQMAAYKVPTAVEFREELPKSAVGKLLKRKLRDEEVAK
VKAEQSS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggataaacgttggcttgctttatatgagaataatttagaggcgaaatctaccattgag
aaaagaaccttaactgacttattaaacgatacagctaacaaacatggaacgaatacggct
attaccttttacgggaaaacgtggtcgtatcaggagctccaaaaatatagtgaagcatta
gcaggtgcgctgcatcaagatcagtttgataaaggggatcgtctagcgatcatgctgcca
aactgtccacattatctattctcattatttggtacatttcgcgcaggcggcgtggttgtc
caagtaaacccaatgtatgttgccagggagcttgagtatattttaaatgactctgaagca
acccatattgtgattctctcagatttatatcctctttttaaatctgtacgcaataaagta
ccaacaaaaaaagcaatcgttgttgctcttaagccggatgcagaggtggagcttgagggt
gatgacatcttgtttgattcctatttgaaaggagcatctgcaccggcgccacaacactct
cttgatcctgaagtggaccttgctgtattgcaatatacagggggaacgactggcgtatca
aaaggggttatgctcactcatatgaatctcatctctaatacggagcaaacatatgacttc
atgtttagcggggatgttagccctcctcataatgcaaaggtggttaatgttctgccatta
tttcatatcttcagcttgacctgctgtaactttgtcacgatccgtcatggcggaaatcag
atactcattccacgttttgacatgcctgaagtactagagacgattaaacgtgaaaagccg
tttcaatttgggggcgtgccaacgatgtatgtcggctttaaccaagttgggaagtataaa
gaatttggtttagatctagttgaaagctatgtcagcgggggatcatccttaccagtagaa
gcacttgaagcttttgaagcaggaacaggaagaaagctttgtgaagggtacgggctcagt
gaagcagcaccggttactcactttaatccttcgttccaagaaagaaaagcaggaagtgtc
ggtatccctcttcctaacacggatgcgaaagtggttgctgaaacggatgcaggatgggaa
gaagttggcgttggagaagtgggagaaatgattatcaatgggccgcaagtgatgaagggg
tactggagaaagcctgaagaaacgaagaaaacgctgagagatggctggctcttcactggt
gatttagcgaaaatggatgaagagggatatttcagcatagtcgaccgtaagaaagatatg
attctagcaagcggctataatgtctacccgcgtgaaattgaagaagtgctctatgggcat
tcaggcgttcaggaagtgattgtactaggtttgcctgatccatacagaggagagacagta
aaagcctatattactcctaagccagatagtactctaacaagccaggaggttatcgacttc
tgcaggaaacaaatggcggcatataaagtaccgacggcagttgaattccgtgaggaactg
ccaaaatcagctgtaggaaagctgttaaagcgaaagcttcgtgatgaagaggtagcaaaa
gtaaaagcggaacagtcgtcttaa
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