Alkalihalophilus pseudofirmus: BpOF4_15745
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Entry
BpOF4_15745 CDS
T01165
Symbol
rnhZ
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bpf
Alkalihalophilus pseudofirmus
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpf03016
]
BpOF4_15745 (rnhZ)
Enzymes [BR:
bpf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
BpOF4_15745 (rnhZ)
Transfer RNA biogenesis [BR:
bpf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
BpOF4_15745 (rnhZ)
Prokaryotic type
BpOF4_15745 (rnhZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Aldolase_II
Motif
Other DBs
NCBI-ProteinID:
ADC51198
UniProt:
D3G0N6
LinkDB
All DBs
Position
1551023..1551940
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AA seq
305 aa
AA seq
DB search
MEFHFLGTGSGVPAIERNVSAMAIRFLQQKGTQWLFDCGEATQHQLLHSPITLTKIDRIF
ITHLHGDHIFGLPGLMGSRSFQGALNPLIIYGPRGLAPFIETSLAVSKTHLRYPYEVIEL
EEGLMFETEHLSVEALALNHVMPSFAFKLTEKDKPGTLDIKKLEEYNIPKGPHYQLLKEG
KTITLEDGRKINGQEFVGPPKNGRIVVIAGDTRPTKEMIKFSRDADILIHEATFRADKAD
HAVQFGHSTTLEAASLAKEAKVKTLLLTHISSRYTGEEEAFLNEAKTIFENTHLAHDLMV
YTLSS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcattttttaggaactggttcaggagttccagctattgagagaaatgtaagt
gcgatggcgatacgttttttgcagcaaaaaggcactcaatggttgtttgactgcggagaa
gcaactcagcatcaattattgcattcacccatcactttaacaaaaattgaccggattttt
atcacacatctacacggcgatcatatttttggcctgcctggattaatgggttcaaggtct
tttcagggtgcgctgaatcctctaatcatttatggaccgagaggcttagctccgtttatt
gagacgtctctagctgtatcaaaaactcatctccggtatccatatgaagtgattgagctt
gaagaaggcttgatgtttgaaacggaacatctttcagtggaagcattggcactaaatcat
gtgatgcctagctttgcgtttaagctgaccgaaaaagataagccaggtacattggatatt
aagaaactagaagagtacaatatcccaaaaggtccacattatcaattgttaaaagaggga
aaaacgatcactttagaagatggtcgcaaaatcaatggacaggagtttgtcggtccccca
aaaaatggccggattgtggtgattgcaggagatacaaggcctactaaagaaatgattaaa
ttcagcagggatgcagatattttgattcatgaggccacatttagagcggataaagcagat
catgctgttcaatttggtcacagcacaacactagaagcggcctcccttgcaaaagaagca
aaagttaagactctgctgctcactcatatcagctcaaggtatacaggtgaggaagaggcg
tttctcaatgaggctaaaacgatttttgaaaacacgcatcttgctcatgatttgatggtg
tatacgctgagttcatga
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