Alkalihalophilus pseudofirmus: BpOF4_19715
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Entry
BpOF4_19715 CDS
T01165
Symbol
truB
Name
(GenBank) tRNA pseudouridine 5S synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bpf
Alkalihalophilus pseudofirmus
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpf03016
]
BpOF4_19715 (truB)
Enzymes [BR:
bpf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BpOF4_19715 (truB)
Transfer RNA biogenesis [BR:
bpf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BpOF4_19715 (truB)
Prokaryotic type
BpOF4_19715 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADC51982
UniProt:
D3FU01
LinkDB
All DBs
Position
complement(2275296..2276216)
Genome browser
AA seq
306 aa
AA seq
DB search
MNNIEGILALLKPAGMTSHDCVMKIRRLYQTKKVGHTGTLDPDVVGVLPICIGKATKVAQ
YMSDYSKTYVGEVTIGFSTTTEDASGEVVETKGVNKPWSKEVIIALLDSFKGEITQIPPM
YSAVKVNGKKLYEYARANQTVERPTRKVRIHRLELTSDLTLNETSNTFSFSFEVECSKGT
YVRTLAVDLGKALGFPAHMSHLKRTASGPFTTEVCTSLSELEEMEGVDERVKVLRPLDEA
IAHLPMLIVDKEVEQLIKYGSVLPEEKGLDEMRFTVYNGQGECLAIYQKHPTKPGLIKPE
KMIWTS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattgaaggaattttagcgttattaaaacctgcagggatgacttctcatgat
tgcgtcatgaaaatccgcagactttatcaaacaaaaaaagtaggccatacaggaacactt
gatccagatgtcgtaggggtcctccctatttgtatcggcaaggcgacaaaggtggctcaa
tacatgtccgattactctaaaacgtatgtaggagaagtaaccattggtttttcgacgact
acagaagatgcaagcggagaagtagttgagacaaagggtgttaataagccttggtctaaa
gaggtcatcatcgccttattagactcctttaaaggagagattactcaaatccctccgatg
tattcagcggttaaagttaatggtaagaaattgtatgaatacgcaagagctaatcaaacg
gttgaacggccaacaaggaaggtcaggattcatcgattagagttaactagcgatctaacc
ttaaatgaaacatcaaacacattttctttttcttttgaagtggaatgtagtaaagggacg
tatgtacgaacacttgcagttgatttgggaaaagctttgggatttcctgcgcatatgtcc
catctaaagcggacagcttctggacccttcacaacggaggtatgcacctctctttccgag
cttgaagaaatggagggcgtagatgaacgtgtaaaagttttaaggccgttagatgaagca
atagctcatctccctatgctcattgtagataaagaggtagaacagctgataaaatacgga
tcagttttaccagaagaaaaagggttagatgaaatgcggtttaccgtatataatggacaa
ggggaatgcttagccatttatcaaaagcatcctactaagcctgggttaattaagccggaa
aaaatgatctggacaagttag
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