Alkalihalophilus pseudofirmus: BpOF4_21799
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Entry
BpOF4_21799 CDS
T01165
Symbol
xerS
Name
(GenBank) site-specific tyrosine recombinase XerS
KO
K20391
HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes
Organism
bpf
Alkalihalophilus pseudofirmus
Pathway
bpf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BpOF4_21799 (xerS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpf03000
]
BpOF4_21799 (xerS)
Transcription factors [BR:
bpf03000
]
Prokaryotic type
Helix-turn-helix
Other families
BpOF4_21799 (xerS)
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Ortholog
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GFIT
Motif
Pfam:
RNPP_C
HTH_3
HTH_31
HTH_19
TPR_12
TPR_10
WDR62-MABP1_CC
Motif
Other DBs
NCBI-ProteinID:
ADC52355
UniProt:
D3G1X9
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All DBs
Position
pBpOF4-02:complement(55609..56568)
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AA seq
319 aa
AA seq
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MRKIGEEVKRLREIRGMTQGRLAKGICNQSEIARIELGRVTPSFHLMGLISSRLNVPIEH
FLTFMFVEREAYFNEVRLVINGFLDDKNYNGLYEFVKKELNIADNKRDSNICYFLEWNLL
VAKQETNQISIEETISNLQHLVVCIRNSTLLIHDWLLEQKVQNSLAIYLTKDKQFQRALD
LYQKILSSSEFTTEKKFLVKVYYNYSKTLYILEQYQKSYEITVIGINLSIDIGNFDYLGQ
LFYQRAQCREKLEHPLINISEDYFNALFIFKQLKKEALLKLLIEKKSGFFDPKVISSILD
IDNLKKEITKTSKNKNVNG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaattggagaagaagtaaaacgtttaagagaaattcggggaatgacacaaggg
agactagctaaaggtatttgtaaccaatctgaaattgcacggattgaattaggtcgagtt
acacctagttttcacttaatgggtctaatttcttctagattaaatgtgcctattgaacac
tttttaacttttatgtttgtggaaagggaggcctattttaatgaggtaaggttggttata
aacggatttctggatgataaaaactataatggcttatatgaatttgtgaagaaggaatta
aatatagcggacaataaaagggatagcaacatatgttactttttggagtggaacttactt
gttgctaaacaagagacaaatcaaatttcaatcgaagagaccataagtaatctgcagcac
ctagtagtctgcataagaaatagtacgttgttaattcatgattggctattggaacaaaaa
gttcaaaacagtctagctatatacttaacaaaagacaaacagtttcaacgtgcattagat
ctctaccagaagattctttcctcttctgaatttactactgaaaagaaatttttggtcaaa
gtgtattataactactctaaaacgttatacatactggagcaatatcaaaaaagttatgaa
attactgtaataggaataaatctatcaattgacattgggaattttgattatttaggtcag
ttgttttatcagagggcgcaatgtagggagaaactggagcatccgcttataaatatcagt
gaagattactttaatgctctttttatttttaaacaattgaagaaagaggcgcttcttaaa
ttactaattgagaagaaaagtggtttctttgatccaaaggttatctcaagtatattagat
atagataatttgaaaaaggaaataacaaaaacctctaagaacaaaaacgttaacggttaa
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