Bathycoccus prasinos: Bathy01g00720
Help
Entry
Bathy01g00720 CDS
T03089
Name
(RefSeq) DNA mismatch repair protein msh-2
KO
K08735
DNA mismatch repair protein MSH2
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Bathy01g00720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy01g00720
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Bathy01g00720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
19017808
NCBI-ProteinID:
XP_007515224
UniProt:
K8EXX2
LinkDB
All DBs
Position
1:complement(131453..134473)
Genome browser
AA seq
1006 aa
AA seq
DB search
MGTTSFAPREQDAILPDASGFVRFYETTFTNVFSKKNDDDDKKESEEEEKQHHSLRFFNR
SKHEGWSVCADDAFYVARRFYKTTTVVKYLKDAGGNSQFILPSVNINQNLFETICRDVLL
HTRERTVEVYESEPNSRGDFKLTKRGSPGNVLDFEDILFDGSKENDLNNNNNKNNANADT
DSLPIVCAVKCVLKQEQRRIGLAFFEYSTRTLRALEFSDEERLGQLESILAQINAREVIV
PNEIDKASGGAMTADAKRIADVIDRCDAMRTAKANSEYFRTDDVEDDLKRLLKSGDNVQA
HRNVLDLPLAVQCLHAVMKFADIGNDAQNHGRCELELFDSGAHVRLDAAALKALNVLPSS
GGGGDRSFGETAGKGSGGGFSLYNLLNRCTSPMGKRVLYRWLKQPLVSVEKISERHDVVE
TFSEESALRDSLRNAHLKSLPDVERLARKLEKKKTTLMDLCKLYQASSAIPHAIDCLERI
PFSDETRKALFISKYISPLKECVEEEKLGKFEALIEHAVDLNKIPDEYVISAEFDDTLAL
LEQQKISTEEEINVVWQEAAEDLTMERDKQLKLEKNNQHGYFFRLTKKDETAARSKLSKS
AQFQILEAKKDGSKFTNKKLRALSQKRLEIDRTYEAKQKHLVQRVLDVAVSFVDIFLKAS
SVMAELDVLCAFAEVAQNAPTPYVRPQMTNADEKELVLLDSRHPLVEVQESCGEFVQNSC
KMIKGESWFQIITGPNMGGKSTFIRQVGVNVLLAQVGSFVPCSKAIIPVRDAIFCRIGAG
DFQLRGVSTFMAEMLESASILRSATEKSLVIIDELGRGTSTYDGFGLAWGIAEHLANEVK
APCLFATHFHELTELKGETGVKNFHVSAKIDVASKKIAMLYALEEGACDQSFGIHCAEFS
GFPAEALEDARKCAEELENGGNSAGNDDKENTTNSNKSDGIDDADATYGRKRAMQFLNDF
KNIPLPQLAPQDVIERVKKLKTELERDASKSKWLQNVFEEINKSAA
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggggacgacttcttttgccccgcgcgaacaggatgcaattcttccggacgcgtctgga
ttcgttcggttttacgagacaacttttacgaacgtcttctcgaagaagaatgatgatgac
gacaaaaaagaaagcgaagaagaagaaaaacaacatcattcgctgcgattcttcaaccgt
tcgaaacacgaaggatggtcggtgtgcgccgacgacgcgttctacgtcgctcggaggttt
tataaaacgaccacggtggtgaagtatctcaaagacgcgggggggaactcgcagtttatt
ttaccgtccgtgaatatcaatcaaaacttattcgaaacgatttgtcgagacgttttgtta
cacacgagagagaggacggtggaagtgtacgaaagcgaaccgaatagtagaggggatttt
aagttgacgaaacgcgggagtcctgggaacgttttggatttcgaagatatcttgttcgac
gggagcaaagagaacgatttgaataataataataacaagaacaacgcaaacgcggatacg
gattcgttaccgatcgtttgcgcggtgaagtgcgttttgaaacaagagcaaagacgcatc
ggtttagcgtttttcgagtactcgacgaggacgttgcgagcgttggagttttcggacgag
gagaggttagggcagttggagtctattttggcgcagattaacgcccgagaggtgattgtg
ccgaacgaaattgataaagcgagcggaggggcgatgacggcggacgcgaagagaatcgcg
gacgtgatcgataggtgcgacgccatgcgaacggcaaaagcgaacagcgaatattttcga
acggacgacgtcgaggacgatttgaagagactgctaaaaagtggcgataacgtgcaagcg
cacagaaacgttttggacttgccgctggccgtgcagtgtttgcacgcggtgatgaaattc
gcggatatcggtaacgacgcgcaaaaccacggaaggtgcgagttagagttgtttgacagc
ggagctcacgtgcgattggacgcggcggcgttgaaagcgttgaacgtgttgccgagcagc
ggtggcggcggggacagatcgttcggggaaaccgccgggaaagggagcggcggaggattc
tccttgtacaacttgctcaatcgatgcacgtcgccgatggggaagagagtgttgtatcga
tggttgaaacaaccgttagtttccgtggagaagatttcggaaaggcacgacgtcgtggag
acgttttctgaggaaagcgctttgagagactcgttgcgtaacgcgcacttgaagtcgtta
ccagacgtcgagcgcttggcgaggaaattggagaagaagaaaacgacgctgatggatttg
tgtaaattataccaagcttcgagcgcgattccgcacgcgatcgattgtttagagcgcatt
cctttttccgacgagacgaggaaagcgttattcatctcaaaatacatctcgccgttgaaa
gagtgcgtggaagaggaaaagttgggcaaatttgaagctttgattgagcacgcggtggat
ttgaacaagatcccagacgagtacgtcatctccgccgagtttgacgacacgttggctctc
ttagagcagcaaaagatatccacggaggaggaaatcaacgtcgtgtggcaagaagccgcg
gaagatttgacgatggaaagagacaagcagttaaaattggaaaagaacaaccaacacggg
tacttttttcgtctgacgaagaaggacgaaaccgcggcgcgatcaaagttatcgaaatcc
gcgcagttccaaatcttagaggcaaaaaaagacggctctaagtttacgaataaaaaattg
cgcgcgttgagtcaaaagaggttagaaatcgatcgaacgtacgaggcgaagcagaaacat
ttggtccaacgcgtcttggacgtggcggtttctttcgtcgatatttttttgaaagcgtcg
tcggtgatggccgagttggacgtcttgtgcgcgttcgccgaggttgcgcaaaacgctccg
acgccgtacgtgagaccgcaaatgaccaacgcggacgaaaaagaactcgtgttgctcgat
tcgagacacccgctcgtggaggtgcaagaatcctgcggcgagtttgtgcaaaactcgtgc
aaaatgatcaaaggcgagagttggtttcaaattatcaccggtccgaacatgggcggtaag
tctacgtttattcgccaagtcggtgtgaacgttttattggcgcaagtcgggtcattcgtt
ccgtgttcaaaagcaatcattccagttcgggatgcgattttctgccgcattggcgccgga
gattttcaattacgcggcgtttccacgttcatggcggaaatgcttgaatccgcgtccatt
ttacgttcggccacggaaaagtcgttggttatcatcgatgagttaggtcgcggcacgtcc
acgtacgacgggttcggtttagcctggggcatcgccgagcacttggcgaacgaagtcaaa
gcgccgtgtttgttcgccacgcacttccacgagttgacggaattaaaaggcgaaactggc
gttaagaattttcacgtttccgcgaaaatcgacgtcgcgagtaagaaaattgccatgttg
tacgctttagaggaaggcgcgtgcgaccaatcctttggcattcactgcgccgagttttcc
ggcttcccggctgaggcgttggaagacgcgcgcaaatgcgccgaagagttggaaaacggt
ggtaactctgctggaaacgacgacaaagagaacaccaccaacagcaataaatcagacggg
atcgacgatgccgacgccacgtacggtcgcaaacgcgccatgcaattcctgaacgatttc
aaaaacatcccgttaccgcaactcgcgccgcaagacgtcatcgaacgcgtcaaaaaactc
aaaacggagttggaacgcgacgcgagtaaatcgaaatggttacaaaacgtcttcgaggaa
attaataagagcgccgcttag
DBGET
integrated database retrieval system
