Bathycoccus prasinos: Bathy01g02030
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Entry
Bathy01g02030 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03022
Basal transcription factors
bpg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Bathy01g02030
09124 Replication and repair
03420 Nucleotide excision repair
Bathy01g02030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpg03021
]
Bathy01g02030
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy01g02030
Transcription machinery [BR:
bpg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Bathy01g02030
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Bathy01g02030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Peptidase_S8
SPT6_acidic
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
19017938
NCBI-ProteinID:
XP_007515292
UniProt:
K8E961
LinkDB
All DBs
Position
1:381088..382200
Genome browser
AA seq
370 aa
AA seq
DB search
MDRDDDVDDDVSLLVVVLETNSQFWFPRSRKQRETTTPSTPSTSLYAFEKVCKDIAAFSS
AYLACNRANRIAVVAAHARKECTFLFRSHLEGDVVLEDEEDEEDKEGDNTKKTKKKKKKR
KKPPTNPRMTFVGDDECDDIGGFANDAQDVDALDISKGLEPLQTTFRRAFFDGLKALSDE
NVVVNYDDDDDDENREQQHATPIAGAISLALTYANRIERDPSLRGRVKSRVLVVQASEDD
AEQYVPMMNAMFAAQSSNILIDCLCLNEKESSFLQQAAFVSGGIYAKPEKSKKGGGEETR
EDLLERALCSFLPDRYTRRFLRPPRAGSIDFRSSCFCHGNRISKGFVCSVCLSVFCKKEG
ACQTCGAAFV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagacgacgacgtggacgacgacgtctcgctcctcgtcgtcgtcctcgaaacg
aattcgcagttttggtttccccgttcccggaaacaacgagagacgacgactccttcgact
ccttcgacttctttatacgcgttcgaaaaagtctgcaaagacatcgccgcgttttcctcc
gcgtatttagcgtgcaatcgtgcgaacagaatcgcggtcgtggccgcgcacgccaggaaa
gagtgcacgtttttgttccggtcgcacttggaaggtgatgttgttctcgaagacgaagaa
gacgaagaagacaaagaaggagataacacgaagaagacaaagaagaagaagaagaagaga
aagaaaccgccgacgaacccgcgaatgacgttcgtcggcgacgacgagtgcgacgacatc
ggcgggttcgcgaacgatgcgcaagacgtggacgctttagatatttcgaaaggtttagaa
ccgttacagacgacgtttcggagagcgtttttcgacggattgaaagcgttgagcgatgaa
aacgtcgtcgtcaattacgacgacgacgacgacgacgagaatcgggagcagcagcacgcg
acgccaatagctggcgcgatatcgttagctttaacctacgcgaatagaatagaacgagat
ccgtctttacggggtcgcgtaaaatcgagagtgttggtcgttcaagcgtccgaagacgac
gccgaacagtacgtgccgatgatgaacgccatgttcgccgcgcaatcgagcaacattctc
atcgactgtttatgcctgaatgagaaagagtctagttttttacaacaagcggcgtttgtc
agcggcggcatatacgcgaaaccggagaaatcgaaaaaaggaggaggagaagagacgcga
gaagatttgctcgagagagcgttatgttcgtttctcccggataggtacactcgacgcttt
ttacgtccaccgagagcgggttcgatcgatttccgttcctcctgtttctgtcacggcaat
cgaatcagcaaaggcttcgtctgttccgtctgtttgtccgtcttttgcaaaaaagaaggt
gcgtgtcaaacctgcggcgccgcgttcgtataa
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