KEGG   Bathycoccus prasinos: Bathy01g02030
Entry
Bathy01g02030     CDS       T03089                                 
Name
(RefSeq) hypothetical protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
bpg  Bathycoccus prasinos
Pathway
bpg03022  Basal transcription factors
bpg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bpg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Bathy01g02030
  09124 Replication and repair
   03420 Nucleotide excision repair
    Bathy01g02030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpg03021]
    Bathy01g02030
   03400 DNA repair and recombination proteins [BR:bpg03400]
    Bathy01g02030
Transcription machinery [BR:bpg03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Bathy01g02030
DNA repair and recombination proteins [BR:bpg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Bathy01g02030
SSDB
Motif
Pfam: Tfb4 SPT6_acidic Peptidase_S8 SDA1_dom
Other DBs
NCBI-GeneID: 19017938
NCBI-ProteinID: XP_007515292
UniProt: K8E961
LinkDB
Position
1:381088..382200
AA seq 370 aa
MDRDDDVDDDVSLLVVVLETNSQFWFPRSRKQRETTTPSTPSTSLYAFEKVCKDIAAFSS
AYLACNRANRIAVVAAHARKECTFLFRSHLEGDVVLEDEEDEEDKEGDNTKKTKKKKKKR
KKPPTNPRMTFVGDDECDDIGGFANDAQDVDALDISKGLEPLQTTFRRAFFDGLKALSDE
NVVVNYDDDDDDENREQQHATPIAGAISLALTYANRIERDPSLRGRVKSRVLVVQASEDD
AEQYVPMMNAMFAAQSSNILIDCLCLNEKESSFLQQAAFVSGGIYAKPEKSKKGGGEETR
EDLLERALCSFLPDRYTRRFLRPPRAGSIDFRSSCFCHGNRISKGFVCSVCLSVFCKKEG
ACQTCGAAFV
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggaccgagacgacgacgtggacgacgacgtctcgctcctcgtcgtcgtcctcgaaacg
aattcgcagttttggtttccccgttcccggaaacaacgagagacgacgactccttcgact
ccttcgacttctttatacgcgttcgaaaaagtctgcaaagacatcgccgcgttttcctcc
gcgtatttagcgtgcaatcgtgcgaacagaatcgcggtcgtggccgcgcacgccaggaaa
gagtgcacgtttttgttccggtcgcacttggaaggtgatgttgttctcgaagacgaagaa
gacgaagaagacaaagaaggagataacacgaagaagacaaagaagaagaagaagaagaga
aagaaaccgccgacgaacccgcgaatgacgttcgtcggcgacgacgagtgcgacgacatc
ggcgggttcgcgaacgatgcgcaagacgtggacgctttagatatttcgaaaggtttagaa
ccgttacagacgacgtttcggagagcgtttttcgacggattgaaagcgttgagcgatgaa
aacgtcgtcgtcaattacgacgacgacgacgacgacgagaatcgggagcagcagcacgcg
acgccaatagctggcgcgatatcgttagctttaacctacgcgaatagaatagaacgagat
ccgtctttacggggtcgcgtaaaatcgagagtgttggtcgttcaagcgtccgaagacgac
gccgaacagtacgtgccgatgatgaacgccatgttcgccgcgcaatcgagcaacattctc
atcgactgtttatgcctgaatgagaaagagtctagttttttacaacaagcggcgtttgtc
agcggcggcatatacgcgaaaccggagaaatcgaaaaaaggaggaggagaagagacgcga
gaagatttgctcgagagagcgttatgttcgtttctcccggataggtacactcgacgcttt
ttacgtccaccgagagcgggttcgatcgatttccgttcctcctgtttctgtcacggcaat
cgaatcagcaaaggcttcgtctgttccgtctgtttgtccgtcttttgcaaaaaagaaggt
gcgtgtcaaacctgcggcgccgcgttcgtataa

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