KEGG   Bathycoccus prasinos: Bathy01g02510
Entry
Bathy01g02510     CDS       T03089                                 
Name
(RefSeq) hypothetical protein
  KO
K14402  cleavage and polyadenylation specificity factor subunit 2
Organism
bpg  Bathycoccus prasinos
Pathway
bpg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bpg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Bathy01g02510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpg03019]
    Bathy01g02510
Messenger RNA biogenesis [BR:bpg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     Bathy01g02510
    U7-dependent histone pre-mRNA processing factors
     Bathy01g02510
SSDB
Motif
Pfam: Lactamase_B_6 CPSF100_C Beta-Casp RMMBL Lactamase_B Anti-Pycsar_Apyc1
Other DBs
NCBI-GeneID: 19017986
NCBI-ProteinID: XP_007515701
UniProt: K8EQ87
LinkDB
Position
1:469915..473193
AA seq 1092 aa
MDQKRKNSFFVVFVVRSFHAHRHFISLSYTMPPKKKTKKATATTRSTEEDDDGGGGAGDV
AATAAVKKKKRAKSPSPFVKEDESEGENNNNANALNTKRKSTARRGKSQTPNDEDDDGGK
EEAEEKKVSTTIQTSQMGKRTERRQRKEAKRNLVLESGNKVALTPLLGGIREDDGARGGT
TTTTEPLCYLLQIDQANILLDCGWDDRFDQTEYVKELEKIAPTLDCVLISHCTQRHVGAV
PLLFSERVKCNPNCKIYASIPTHKLGQMLCYDIALGYSEFRGEFGEDVGYSLDDVDLAFS
KFVPVKYQQHSRVSVRRESAGGGGGGESDAGTNSKNSGGATNSDIVVEAINAGHTLGGSC
WRISKDAEDIVYAVDYNMRKERHLAGTSLAETVHRPSVLITDCRNVDRKAPESRLQVRDL
PLVDCVLKHARMEGNVVICCDAVGRTLELALLLEETWKNQNLGSYQLVLFNNVAANALEF
ARSHLEWMNEDVGLKFDSTRQNVFDVKRLFPCHSYEDFTRLPPGPKVVLASLASLEGGFA
RKLFVEWASDAKNCFIWPDEIGRQVGLAREIVEKCSKGGAKTTSSKTKKKDVIMKVELAR
RELLSGKELEAWEHEQEEKRLEAEKRREEEAKRLAEEEEKKRMLEEEMDVDAATLSQPVE
DENIYGEKKAGVAEEEEKVERLVPPPQVNEETGIALRDKQMSFERRECIVDGFIPESFEH
LVFPDETKLSSSSSDPSGMSAKTEYGEAIDADAFFRVANELRPEMTRDQSFESTGDVDKL
AGVDGIMDATMGIAAKLTNKQPDMDIDANAGKEEKALERPVGIPTKVVKETKEIVVKAAI
ESNFDYDGLADGRSVKAIIPRLEPRRVILVSGTVKDAEKLASHLYNDSEHFPKSSKIDYP
KNNETLDASSVHPTYKVRLSEAVLSSARLRQVSGYAVGWIDGVIGPIPEDGSAPELLPVP
VNALKLTVSKTVKDESLLAGKVTGPSLIKKEPTAAALVVEDNEENEGTEINIVTKHHRRS
AFVGDVRLSEFRRYLQRMGVPAEFGEGGALVCANGQVVVRRRAEDDELIVEGSISDAYFN
VRDMLYAQYSII
NT seq 3279 nt   +upstreamnt  +downstreamnt
atggaccaaaaacgcaaaaattccttcttcgttgttttcgttgttcgttcgtttcatgca
catcgacacttcatctctctctcgtatactatgccaccgaagaagaagaccaagaaagcg
accgcgaccactcggtccaccgaggaggacgacgacggtggtggtggtgcaggtgatgtt
gctgctactgctgctgtgaagaaaaagaagagagcaaagtcaccgtcgcctttcgtgaaa
gaagatgaatccgaaggagaaaacaacaacaacgcgaacgctttgaatactaaaaggaaa
tcgaccgcgcgaagagggaaatcgcaaacgccgaacgatgaggacgacgacggcggaaaa
gaagaagcggaggagaagaaagtttcgacgacgattcagacgagtcaaatggggaagcga
acagaaaggagacaaagaaaggaagcgaagagaaatttagtcctcgagtctgggaacaaa
gtcgctttgacgcctctattgggaggcattcgggaggacgacggcgcgcgaggcggcacg
acgacgacgactgaaccgctgtgctatttattgcaaatagaccaggcgaacatactttta
gattgcggatgggacgacaggttcgatcaaaccgagtacgtgaaagagttggagaaaatc
gcgcctacgttggattgcgtgttgatctcgcactgcacgcaacgacacgtcggcgcggta
cctttgctcttctccgagcgagtgaaatgtaacccaaactgtaaaatttacgcgtcgata
ccgacgcacaagttggggcaaatgttgtgttacgacattgcgctcgggtattccgagttt
cgaggggagtttggagaagatgtgggatacagtctagatgacgtggatttggcgtttagt
aagtttgttccggtgaagtatcagcaacattcgagggtgagcgtgaggagagaaagcgca
gggggtggtggtggtggtgagagcgacgcgggtactaatagcaaaaatagtggtggtgct
accaatagcgatattgtcgtcgaagctatcaacgccggtcacacgttaggcggttcatgt
tggcgcatatcaaaagacgccgaggatatcgtctacgcggttgattacaacatgcggaaa
gaacgacatttagccgggacgagtttagcagagactgtgcatcgaccgtcggttttaatt
acagattgtcggaacgtggatcgaaaagcgcccgagtcgaggttgcaagtgagagatttg
ccgttagtcgattgcgtcttaaaacacgcgcgcatggaagggaacgtggttatttgttgc
gacgccgttggaaggacgttagagttggctttattattagaagagacgtggaagaatcaa
aatttaggaagctatcagttagtgttgttcaataacgtcgccgcaaacgcgttggagttc
gcgcggtcccatttagaatggatgaacgaagacgttggtttgaaattcgatagcacgcga
cagaacgtgttcgacgtgaaaagattgtttccgtgtcactcgtacgaagattttacgaga
ttacctccgggaccgaaagttgtccttgcatcgttggcgtctttagaaggtgggtttgcg
aggaagttgttcgttgaatgggcctcggacgcgaagaattgtttcatttggccggacgaa
attggtcgccaagttggattagcgagagagattgtcgaaaagtgcagtaagggaggagca
aagacgacttcttcaaagacgaaaaagaaagacgtgatcatgaaagttgaattagcgagg
cgagaattgctgtctgggaaagagttggaagcgtgggagcacgaacaagaagagaaacgt
ctcgaagcggaaaagaggagagaagaagaagcgaagcgactggccgaagaagaagagaag
aaacgtatgttggaggaagagatggatgtggacgctgcgacgctctcgcaaccagttgaa
gacgaaaatatttacggtgaaaagaaagcgggtgtcgcagaggaagaagaaaaagttgag
cgtttggtaccgccacctcaagtaaacgaggaaactggtattgcgctgcgagacaagcaa
atgtcgtttgagcgacgcgagtgcatcgtcgatggatttattcccgaaagtttcgagcat
ctcgtctttccggacgaaacgaaattatcttcttcatcatccgatccctcgggtatgagt
gcaaaaactgagtacggggaagccatcgatgcggacgcgttctttagagtcgcgaacgaa
ttaagaccggaaatgacgagagatcaatcgtttgaaagtaccggcgacgtcgataaactc
gcgggcgtagatggcatcatggacgcgacgatgggaatagcagcgaaattgactaacaaa
caaccggatatggatatagatgcgaatgcgggtaaagaagagaaagctctcgaacgaccg
gtgggaataccaacgaaagtcgtcaaggaaacgaaagaaatcgtcgtgaaagcggcaatt
gaatcaaactttgattacgacggattagccgatggtcgatcagtgaaagcaatcatcccg
cgtctagaaccgcgacgagtaattctcgtgagtggtactgtgaaagatgccgagaagctt
gcttcgcacttatacaacgattccgaacacttcccgaagagctcgaagattgattatccg
aagaacaacgagacgttagatgcatcctcggtacatccgacgtacaaggttcgactttct
gaagcggttttatcctccgcgcgtttgcgacaggtgagtggctatgccgtcggttggatc
gatggcgtcattgggccaatccctgaagatggctcggcgccggagttgctcccggtccca
gtgaatgctttgaaattaaccgtatcaaaaacagttaaagacgaatctttactcgctgga
aaagtcaccggtccttctttaataaagaaagaaccaaccgccgccgctctcgtggtagaa
gacaacgaagaaaatgaaggtacagaaatcaacatcgtgactaaacatcaccgacgctcg
gcgttcgtgggtgacgttcgtttgtccgagtttagaaggtatttgcagagaatgggcgta
cccgccgagtttggcgaaggcggtgctttagtttgcgcgaatggacaagtcgtcgttcgt
cgaagagccgaagacgatgagttgattgttgaaggatcaatctcggatgcgtacttcaac
gtcagagacatgctctatgcgcaatactcaattatttaa

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