Bathycoccus prasinos: Bathy01g02510
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Entry
Bathy01g02510 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Bathy01g02510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpg03019
]
Bathy01g02510
Messenger RNA biogenesis [BR:
bpg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
Bathy01g02510
U7-dependent histone pre-mRNA processing factors
Bathy01g02510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
19017986
NCBI-ProteinID:
XP_007515701
UniProt:
K8EQ87
LinkDB
All DBs
Position
1:469915..473193
Genome browser
AA seq
1092 aa
AA seq
DB search
MDQKRKNSFFVVFVVRSFHAHRHFISLSYTMPPKKKTKKATATTRSTEEDDDGGGGAGDV
AATAAVKKKKRAKSPSPFVKEDESEGENNNNANALNTKRKSTARRGKSQTPNDEDDDGGK
EEAEEKKVSTTIQTSQMGKRTERRQRKEAKRNLVLESGNKVALTPLLGGIREDDGARGGT
TTTTEPLCYLLQIDQANILLDCGWDDRFDQTEYVKELEKIAPTLDCVLISHCTQRHVGAV
PLLFSERVKCNPNCKIYASIPTHKLGQMLCYDIALGYSEFRGEFGEDVGYSLDDVDLAFS
KFVPVKYQQHSRVSVRRESAGGGGGGESDAGTNSKNSGGATNSDIVVEAINAGHTLGGSC
WRISKDAEDIVYAVDYNMRKERHLAGTSLAETVHRPSVLITDCRNVDRKAPESRLQVRDL
PLVDCVLKHARMEGNVVICCDAVGRTLELALLLEETWKNQNLGSYQLVLFNNVAANALEF
ARSHLEWMNEDVGLKFDSTRQNVFDVKRLFPCHSYEDFTRLPPGPKVVLASLASLEGGFA
RKLFVEWASDAKNCFIWPDEIGRQVGLAREIVEKCSKGGAKTTSSKTKKKDVIMKVELAR
RELLSGKELEAWEHEQEEKRLEAEKRREEEAKRLAEEEEKKRMLEEEMDVDAATLSQPVE
DENIYGEKKAGVAEEEEKVERLVPPPQVNEETGIALRDKQMSFERRECIVDGFIPESFEH
LVFPDETKLSSSSSDPSGMSAKTEYGEAIDADAFFRVANELRPEMTRDQSFESTGDVDKL
AGVDGIMDATMGIAAKLTNKQPDMDIDANAGKEEKALERPVGIPTKVVKETKEIVVKAAI
ESNFDYDGLADGRSVKAIIPRLEPRRVILVSGTVKDAEKLASHLYNDSEHFPKSSKIDYP
KNNETLDASSVHPTYKVRLSEAVLSSARLRQVSGYAVGWIDGVIGPIPEDGSAPELLPVP
VNALKLTVSKTVKDESLLAGKVTGPSLIKKEPTAAALVVEDNEENEGTEINIVTKHHRRS
AFVGDVRLSEFRRYLQRMGVPAEFGEGGALVCANGQVVVRRRAEDDELIVEGSISDAYFN
VRDMLYAQYSII
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaaacgcaaaaattccttcttcgttgttttcgttgttcgttcgtttcatgca
catcgacacttcatctctctctcgtatactatgccaccgaagaagaagaccaagaaagcg
accgcgaccactcggtccaccgaggaggacgacgacggtggtggtggtgcaggtgatgtt
gctgctactgctgctgtgaagaaaaagaagagagcaaagtcaccgtcgcctttcgtgaaa
gaagatgaatccgaaggagaaaacaacaacaacgcgaacgctttgaatactaaaaggaaa
tcgaccgcgcgaagagggaaatcgcaaacgccgaacgatgaggacgacgacggcggaaaa
gaagaagcggaggagaagaaagtttcgacgacgattcagacgagtcaaatggggaagcga
acagaaaggagacaaagaaaggaagcgaagagaaatttagtcctcgagtctgggaacaaa
gtcgctttgacgcctctattgggaggcattcgggaggacgacggcgcgcgaggcggcacg
acgacgacgactgaaccgctgtgctatttattgcaaatagaccaggcgaacatactttta
gattgcggatgggacgacaggttcgatcaaaccgagtacgtgaaagagttggagaaaatc
gcgcctacgttggattgcgtgttgatctcgcactgcacgcaacgacacgtcggcgcggta
cctttgctcttctccgagcgagtgaaatgtaacccaaactgtaaaatttacgcgtcgata
ccgacgcacaagttggggcaaatgttgtgttacgacattgcgctcgggtattccgagttt
cgaggggagtttggagaagatgtgggatacagtctagatgacgtggatttggcgtttagt
aagtttgttccggtgaagtatcagcaacattcgagggtgagcgtgaggagagaaagcgca
gggggtggtggtggtggtgagagcgacgcgggtactaatagcaaaaatagtggtggtgct
accaatagcgatattgtcgtcgaagctatcaacgccggtcacacgttaggcggttcatgt
tggcgcatatcaaaagacgccgaggatatcgtctacgcggttgattacaacatgcggaaa
gaacgacatttagccgggacgagtttagcagagactgtgcatcgaccgtcggttttaatt
acagattgtcggaacgtggatcgaaaagcgcccgagtcgaggttgcaagtgagagatttg
ccgttagtcgattgcgtcttaaaacacgcgcgcatggaagggaacgtggttatttgttgc
gacgccgttggaaggacgttagagttggctttattattagaagagacgtggaagaatcaa
aatttaggaagctatcagttagtgttgttcaataacgtcgccgcaaacgcgttggagttc
gcgcggtcccatttagaatggatgaacgaagacgttggtttgaaattcgatagcacgcga
cagaacgtgttcgacgtgaaaagattgtttccgtgtcactcgtacgaagattttacgaga
ttacctccgggaccgaaagttgtccttgcatcgttggcgtctttagaaggtgggtttgcg
aggaagttgttcgttgaatgggcctcggacgcgaagaattgtttcatttggccggacgaa
attggtcgccaagttggattagcgagagagattgtcgaaaagtgcagtaagggaggagca
aagacgacttcttcaaagacgaaaaagaaagacgtgatcatgaaagttgaattagcgagg
cgagaattgctgtctgggaaagagttggaagcgtgggagcacgaacaagaagagaaacgt
ctcgaagcggaaaagaggagagaagaagaagcgaagcgactggccgaagaagaagagaag
aaacgtatgttggaggaagagatggatgtggacgctgcgacgctctcgcaaccagttgaa
gacgaaaatatttacggtgaaaagaaagcgggtgtcgcagaggaagaagaaaaagttgag
cgtttggtaccgccacctcaagtaaacgaggaaactggtattgcgctgcgagacaagcaa
atgtcgtttgagcgacgcgagtgcatcgtcgatggatttattcccgaaagtttcgagcat
ctcgtctttccggacgaaacgaaattatcttcttcatcatccgatccctcgggtatgagt
gcaaaaactgagtacggggaagccatcgatgcggacgcgttctttagagtcgcgaacgaa
ttaagaccggaaatgacgagagatcaatcgtttgaaagtaccggcgacgtcgataaactc
gcgggcgtagatggcatcatggacgcgacgatgggaatagcagcgaaattgactaacaaa
caaccggatatggatatagatgcgaatgcgggtaaagaagagaaagctctcgaacgaccg
gtgggaataccaacgaaagtcgtcaaggaaacgaaagaaatcgtcgtgaaagcggcaatt
gaatcaaactttgattacgacggattagccgatggtcgatcagtgaaagcaatcatcccg
cgtctagaaccgcgacgagtaattctcgtgagtggtactgtgaaagatgccgagaagctt
gcttcgcacttatacaacgattccgaacacttcccgaagagctcgaagattgattatccg
aagaacaacgagacgttagatgcatcctcggtacatccgacgtacaaggttcgactttct
gaagcggttttatcctccgcgcgtttgcgacaggtgagtggctatgccgtcggttggatc
gatggcgtcattgggccaatccctgaagatggctcggcgccggagttgctcccggtccca
gtgaatgctttgaaattaaccgtatcaaaaacagttaaagacgaatctttactcgctgga
aaagtcaccggtccttctttaataaagaaagaaccaaccgccgccgctctcgtggtagaa
gacaacgaagaaaatgaaggtacagaaatcaacatcgtgactaaacatcaccgacgctcg
gcgttcgtgggtgacgttcgtttgtccgagtttagaaggtatttgcagagaatgggcgta
cccgccgagtttggcgaaggcggtgctttagtttgcgcgaatggacaagtcgtcgttcgt
cgaagagccgaagacgatgagttgattgttgaaggatcaatctcggatgcgtacttcaac
gtcagagacatgctctatgcgcaatactcaattatttaa
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