Bathycoccus prasinos: Bathy01g06740
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Entry
Bathy01g06740 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Bathy01g06740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpg03041
]
Bathy01g06740
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy01g06740
Enzymes [BR:
bpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bathy01g06740
Spliceosome [BR:
bpg03041
]
Complex A
U1 snRNP components
U1 related factors
Bathy01g06740
Complex B
Bathy01g06740
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
Pre-60S particles
Helicases
Bathy01g06740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
LprI
AAA_22
EzrA
AAA_30
Rpn9_C
Motif
Other DBs
NCBI-GeneID:
19018409
NCBI-ProteinID:
XP_007515604
UniProt:
K8EZ32
LinkDB
All DBs
Position
1:1227604..1229331
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AA seq
575 aa
AA seq
DB search
MGGGYVPPHLRASDAAESTSSLSGGGNGAFNNDDSGGLGPSAGERSNHQQHRSRTTTAAE
DNTTTNKIKTKTKWQPSERVLNLTKSQIEDMRERLNVLAESPEEDTNEYAPIESFEDMKL
DREIALSIKAHGFDKPTPIQAQGIPVILSGSDVLGCAETGSGKTAAFAIPMIHYCVSISD
AYGATRRGDGPTAIVLAPTRELAQQIEKETKAFSQAIDKRRFKTTIVVGGSSMNEQRGDL
RNGVECVVATPGRLIDHIHQNNTNLRRASFLVLDEADRMLDMGFEQQILEILNATPKPRQ
TLLFSATMPPEVEVLAGEYLVKPVKVKVGTVSAPTSNVAQSLEKVPNDVAKIDRLCRMLV
EEKMESVAHGNAPPMSIVFVERKAKAEDVADMLNAEGVATASLHGGRTQGEREAALKDFT
RGLCSVLVATDVAARGLDVKGVQHVVNMDLPRNFEDYVHRIGRTGRNGMTGRATSFYTDS
DAFIVSQIKRALQELESGNAFAFATGKEARAKEKEAQRAWREERSADQSKTETDSGGIIS
VDDKFKSMLVTSANAATGNQSGAADDAWGSDEDDF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggatacgtgccaccgcacctgcgcgcctcagacgcggcagaatcaacgtct
tctttaagtggtggtggtaatggtgcctttaacaacgacgacagcggcggcttaggccct
tccgccggggaaaggtcgaatcatcaacaacatcgttcgagaacaacaacggcggctgag
gataataccacgacgaacaaaataaagacgaagacaaaatggcaaccgtcggaacgcgtt
ctaaacctaaccaaatcacaaatcgaggacatgagagaacggctaaacgttctcgcggaa
agcccggaagaagacacgaacgagtacgccccgatcgagagcttcgaggacatgaaattg
gacagagagattgccttgtcgattaaagcgcacgggttcgataagccgacgccgatacag
gcgcaagggataccggtgatattatccgggagcgatgtcctggggtgcgcggagactggg
agcgggaaaacagccgcgtttgcgataccgatgattcattactgcgtgtcgatttcggac
gcgtacggcgcgacgagaagaggagacggaccgacggcgattgttttagcgccgacgaga
gagttggcgcaacaaatcgagaaagagacgaaagcgttttcgcaagcgatcgataagaga
cgctttaagacgactatcgtcgttggtgggtcgagcatgaacgaacagagaggcgatttg
agaaacggcgtcgagtgcgtggtcgccacgccggggaggttgatcgatcacatacaccaa
aataacaccaatttacgacgcgcgtcgtttctagtcttggacgaagccgatcggatgtta
gatatgggttttgaacaacaaattttagagattttaaacgcgactccgaaaccgaggcaa
acgttgttgtttagcgcgacgatgccgccggaagttgaagttttagccggagagtattta
gtgaaaccagtaaaagtgaaagtaggcacagtctcggcgccaacctcgaacgtggcgcag
agtttagaaaaagtaccgaacgatgtcgcaaaaatcgatcgattgtgtcgtatgctcgtg
gaggagaagatggaatcggtcgcgcacggcaacgcgccgccgatgtccatcgtgtttgtc
gaacgtaaagcgaaagcggaagacgtggcggatatgttgaacgcggaaggtgtggctacg
gcgtctttacacggcgggagaacgcaaggcgaacgcgaagcagctttgaaggattttacc
agaggcttgtgttccgtcttggtcgctacggacgtcgcggcgagaggattggacgtcaaa
ggcgtccaacacgtcgtgaacatggacttgccgaggaactttgaagattacgtccacaga
atcggtcgtaccggacgaaacggcatgactggtagagccacgtccttttacacagactcg
gacgctttcatcgtctcgcaaatcaaacgcgctttacaagagctcgaaagcggcaacgcg
tttgctttcgccaccggtaaagaagccagagcgaaagaaaaagaagcgcaaagagcgtgg
agggaagagcgaagcgccgaccaatcgaaaacagaaaccgactcgggcggtatcatctcc
gtcgacgacaagttcaaatccatgctcgtgacgagtgccaacgccgcgaccggaaatcaa
tccggcgccgccgacgacgcctggggaagcgacgaagacgacttttaa
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