Bathycoccus prasinos: Bathy02g00540
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Entry
Bathy02g00540 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K13210
far upstream element-binding protein
Organism
bpg
Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpg03019
]
Bathy02g00540
03041 Spliceosome [BR:
bpg03041
]
Bathy02g00540
Messenger RNA biogenesis [BR:
bpg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Bathy02g00540
Spliceosome [BR:
bpg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
Bathy02g00540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
WW
KH_2
KH_KhpA-B
KH_SLS1_1
KH_DEAH11_2nd
Glyco_hyd_101C
KH_N4BP1_2nd
Motif
Other DBs
NCBI-GeneID:
19017168
NCBI-ProteinID:
XP_007514574
UniProt:
K8EAQ0
LinkDB
All DBs
Position
2:complement(104524..106308)
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AA seq
594 aa
AA seq
DB search
MSTRRARENDDLHDVPSDPRKRSRAAVSNDDDVNKDDALHAPPPPQGGGVTIPSTEALQS
LLQSVNNAAAAAAAAQPTTSTPSIHHQNGTTTIQAPRDPRSRSSTRAAQAAQAQAQQQHQ
HVGVGVVPQYGAVATGGGPPPNVHGGATTTLPHQMIHQRVPPPPPAQQQQQQVVHTQQQT
VYLQQPQTTTTTAVLHGGGTVQYAYPPPPPGQTTTTTTVLSVPPPPPGQGVAAGTAATVP
VSILRPGMILPSNMPKELPVGHIIEQIPCPQENAGKVIGHGGEKINQLQQATKAIVKIQS
SADVPKGAPRLITIAGAPECVRHAIEQLLPVVNASKAPPANNIPVFQANMGAPQQQVLEI
RIAVPDNMIGRVIGRGGETIKRISDESGARLQIERESNEVSAKGDASQLEIARMLIHDIV
TAPVRQAPAPGAGAGTSGEGKPEYVVIEIDSQGQEGRIIGRGGENIRSMAMTSGAKIQID
KETKMIKISGFKDKVETAKHMLEAFMADYVPRDQQQYQKTTDVAASAAATTAIFGQTLEQ
QNAAAAHEASLKKEEEEEKPLWETHQSPEGFTYYYNTTTGETQWEMPDDYDGFS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgagaagagcgagggagaacgacgacttacacgatgtcccgtccgacccgcga
aaacgatctcgcgctgctgtatcaaacgacgacgacgtaaacaaagacgacgctttgcac
gcaccgccaccaccgcaaggaggaggagtgactattccgtccacggaagcgttgcagtct
ctcttgcaatccgtgaataacgccgccgctgctgctgccgccgcgcaaccaacaacatca
acgccgtcaattcatcaccaaaacggaacgacgacgattcaggcaccgagagacccgagg
agtcgaagcagcacgcgagcggcacaagcagcgcaagcgcaagctcaacaacaacatcag
cacgtgggggtgggggttgtgccgcaatacggagcagtagcaaccggtggtgggcctcct
ccgaacgtgcacggaggtgcgacgacgacgcttccacatcagatgattcatcaaagagtg
cctccgcctccgccggcgcaacaacaacaacaacaagtcgtacacacgcaacagcagacg
gtatacttgcaacaaccacaaacaaccacaacaacagcagtattacatggcggtggtacg
gttcaatacgcgtatccgcctccgcctccggggcagacgacgacgacgacgacggtgctt
tcggtgccgccgccgccgccgggacaaggcgtcgcggcggggacggcggcgacagttccg
gtttcgattttgcggccggggatgattttaccgtcgaatatgccgaaagagttaccagtt
ggacacatcatcgagcaaattccgtgcccgcaagagaacgcggggaaagttatcgggcac
ggcggcgagaaaattaatcagttgcaacaagcgacgaaagcgatcgtgaaaatacaatcc
tctgcggatgtcccgaaaggcgcgccgagattaatcaccatagctggcgctccagagtgc
gtgcgacacgccatcgaacagttgttgcccgtagtcaacgcgtctaaagcgccaccggcg
aataatattccggtgttccaagcgaacatgggagcgccgcaacaacaagtgcttgaaatt
agaatcgccgtcccggataacatgattggaagagtcattggacgcggaggggaaacaatc
aaacgcatctcggacgaatccggggccagattacaaattgagcgcgaatcgaacgaagtc
tccgcgaaaggcgacgcttcgcaactagaaattgctcgaatgctcatccacgacatcgtc
accgcgccggttcgacaagcgccggcgccgggcgcaggggcgggtacttccggagagggg
aagccagaatacgtcgtcatagagattgattcgcaaggacaggagggtcgcatcattgga
agaggcggtgaaaatatccgaagcatggcgatgacgtccggagcgaagatccaaatcgac
aaagaaacgaaaatgattaaaataagcggtttcaaagataaagtcgaaaccgccaaacac
atgttagaagcgttcatggcggattacgtcccgagagatcaacaacaataccaaaagacc
accgatgttgccgcttcagcggccgctaccactgcaatctttgggcaaactttagagcaa
caaaacgccgccgccgcgcacgaagcctcgttgaaaaaagaagaagaggaagagaagccg
ttgtgggagacgcatcaaagcccggaaggattcacgtattattacaacacgacgacgggt
gaaacgcagtgggagatgcccgacgattacgacggttttagttaa
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