Bathycoccus prasinos: Bathy02g03880
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Entry
Bathy02g03880 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Bathy02g03880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpg03041
]
Bathy02g03880
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy02g03880
Enzymes [BR:
bpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bathy02g03880
Spliceosome [BR:
bpg03041
]
Complex A
U1 snRNP components
U1 related factors
Bathy02g03880
Complex B
Bathy02g03880
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
Pre-60S particles
Helicases
Bathy02g03880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
19017501
NCBI-ProteinID:
XP_007515084
UniProt:
K8EBT6
LinkDB
All DBs
Position
2:725833..728010
Genome browser
AA seq
725 aa
AA seq
DB search
MTVDFLARKQSKKNAKRLASLNKKGENERRNRAKRGRNRNTVGMCNFAPPLPPALAEEDE
QNEAEKKMKKRKMERERLARKAMRKKVKMEMEKNVMGERGGKGEETGGGSDDEESEKSES
EEEEDKEQNQNNNVPEYFIDAMKTIGHRRIAPIQKSSWAALCSNSSDCLSVAPPGSGKTL
AFLLPAFDVVIKRVAEFMSSTNGNKNGSNNAISRKNVIDGLIVAPTRELAQQIASVGNKL
KRAAPVKLVCVVGGTNQQEQEESLLAPTKLGVLVVGTPGRLCATVCFNAGGTKKSDDGSG
KSVVVPASENRLGDCKIFILDEADRMLALGFEPQLEQLYENLPKERQTALFSATFPAKVK
QIARKWLKKDYEKVTLSANAVDISAQNAEKGKEELVQRASKVIQTVHVCAEHKKSRKLMK
YVDNLRKEDGRARSRVLVFTNRIKTVKFVKDLLVKHGEKVSTLHGEMRQDKRELALKDFK
AGKTPILVATDVAGRGLDVAGLECVVNWDFPGSIEQYQHRIGRAGRNEKVGSALSFFTRK
FAPLAKDLIELLANAKQFVDPNLKILAKAAEALPELENKFRDKFGNGDEPIDERGEDDDD
DDDDEKQGGGDVEEEKEKEKNGKKSNMKKKKREEKDEDGGADEFTVPKDKPSIGDGTKRK
TQPSWWEADGSHGSTSAHLFGKKKREEMKNPAMRNTLRCGPNEQEIKVNAAMSSKRKKNH
QKKRK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgatttcctcgcgcgaaagcaatcgaaaaagaacgccaaacgtctcgcctct
ctgaacaagaaaggcgaaaacgagcgcagaaaccgcgcgaagcgagggagaaaccgaaac
accgtcggcatgtgcaatttcgcgcctccgttgccgccggcgttggcggaggaggacgaa
cagaacgaggcggagaaaaaaatgaagaagaggaagatggagagggaaaggttggcgagg
aaagcgatgaggaagaaagtgaagatggagatggagaagaacgtgatgggagaaagagga
ggaaaaggagaggaaacgggtggcggctcggacgatgaagaatcagagaagtcggaaagc
gaagaggaggaagataaagaacaaaatcaaaacaataacgtcccggagtatttcatcgac
gcgatgaaaacaatcggtcatcgacggatagcgccgatacagaaatcgtcctgggcggct
ttgtgtagtaactcgtcggattgtttatccgtggcgccgccggggagcgggaagacgttg
gcgtttttgttgccggcgttcgacgtggtgattaagagggtggcggagtttatgagtagt
acgaacggtaataaaaacggcagtaacaacgctatcagtaggaagaatgtgatcgatggt
ctcatcgtcgcgccgacgagagaattggcgcagcagattgcgagcgtcgggaataagttg
aaacgagcggcgccggtgaaattagtatgcgtggttggcgggacgaatcagcaagagcaa
gaggagagcttgttagcgccgacaaagttaggggttttagtggttggaacgccggggaga
ttgtgtgcgacggtatgttttaacgccggtgggaccaagaaaagcgacgacgggtcgggg
aaatccgtagtcgttccggcgagcgagaatcgattaggcgattgtaagattttcatttta
gacgaagccgatagaatgttagcgcttggttttgaacctcagttggagcaactgtacgag
aatctaccgaaagaaagacaaacggctttattttcggcgacctttccggcgaaagtgaaa
cagattgccagaaagtggttgaagaaagactacgagaaggtgactttgagtgcaaacgcg
gtcgacatatcggcgcaaaacgccgagaaagggaaggaagaactcgtacaacgcgcctcg
aaagttattcaaaccgttcacgtgtgcgctgagcacaagaaatcgcgaaagttgatgaaa
tatgtcgataacttacggaaagaggacggtcgcgctcggtcgcgcgtgctcgtgtttacc
aatcgcatcaaaacggtaaagtttgtgaaagatttgttggtcaaacacggcgaaaaagtg
tccacgttacacggtgaaatgcgtcaagataagagagagttggccttgaaagatttcaag
gctggaaaaacgccaatcttagtcgctacggacgtcgccggtcgaggcttggacgtcgcc
ggtttagagtgcgtggtcaattgggatttcccgggaagcatcgagcagtatcaacacaga
atcggccgagctggaagaaacgagaaagttgggagcgctctgagttttttcacgaggaag
tttgcccctttggcaaaagatttaatcgaattgttagccaacgcgaaacagtttgtcgat
ccgaatttgaagattttagcgaaagctgccgaggcgttgccggaattagaaaacaagttt
cgagacaaatttggtaacggcgacgaaccaatcgatgagcgcggtgaagacgacgacgac
gacgacgacgatgaaaaacaaggaggaggagatgtcgaagaagaaaaagaaaaagagaag
aatggaaagaaatcgaatatgaagaaaaagaaaagagaagaaaaagatgaagatggaggc
gccgacgagtttaccgtgccaaaagataaaccgtccattggcgacggcactaaaaggaag
acccaaccgagttggtgggaggctgatggttcacatggaagtacatcggcgcacctgttc
ggaaagaagaagcgagaagagatgaaaaatcctgccatgcgaaacacgttgcgatgcgga
cccaacgaacaagagataaaagtcaacgctgccatgtcgtccaagcgcaaaaaaaatcat
caaaagaaacgaaagtag
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