Bathycoccus prasinos: Bathy02g04670
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Entry
Bathy02g04670 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
bpg
Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpg03016
]
Bathy02g04670
Enzymes [BR:
bpg01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Bathy02g04670
Transfer RNA biogenesis [BR:
bpg03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
Bathy02g04670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
TSEN34_N
Motif
Other DBs
NCBI-GeneID:
19017580
NCBI-ProteinID:
XP_007514647
UniProt:
K8EAL7
LinkDB
All DBs
Position
2:complement(863501..864508)
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AA seq
335 aa
AA seq
DB search
MEEKDDEDSEAKARVEIHLEDEDAQTTGQALLWTAREYKIVRQKYRIIGSLLGSLPGYRQ
QDSTRGLPVLLSKEEVYVLKENAWARMRFKTKKRKRNSSDFNEEAEERELLLQPQITTTR
NQLRAMKASKKSQWGGAAKKKQKVVPKKKNDKEEETKKKSSNNRDRIVDWEQVLGRSSSV
VLPLTTSEMDDDARKLDDAPPEEEEEAYKGRVWRKMSKIDRYKCAVFKDLHEKGFTMTSA
AKFGGDYLAYPGDPMLFHAYFTVRVLERGEKMTPLSCSSVTRMAHAARKNVVFAFCGEEE
DEKGGDNKNNNNDGVLRIQYFTCVPDIELSSNRGF
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaggacgacgaggactcagaggcaaaagcgagagtagaaatccacctcgag
gacgaggatgctcaaaccacagggcaggcgttactctggaccgcccgagaatacaaaatc
gttcggcaaaagtatcgcatcattggttctttgctcggttctttacccggctaccggcaa
caagattccactcgcgggttaccggtgttgttgagcaaagaggaggtgtacgtgctgaaa
gagaacgcgtgggcgaggatgcggttcaaaacgaaaaagaggaaacggaattcgagtgat
tttaacgaggaggcggaagaacgggagcttttgttgcagcctcagattacgacgacgagg
aatcaattgagagcgatgaaagcgagcaagaaaagccagtggggcggagcggcgaagaag
aaacagaaagtagtacccaagaagaagaacgataaagaagaagaaacgaagaagaaaagc
agcaataatagggatagaattgtagactgggagcaagttttagggagatcgagctcggtg
gtgttgccgttaaccacgagcgagatggacgacgacgcgcgaaagttggacgacgcgccg
cccgaggaggaggaggaggcgtacaaggggagagtttggaggaagatgtcgaaaattgat
cggtataaatgcgcggtgttcaaggatttacacgagaaagggtttacgatgacctcggcg
gcaaagtttggtggtgattacttggcgtatccgggagatccgatgttatttcacgcgtat
ttcacggtgagagtgttggagagaggggagaagatgacgccgttaagttgttcgtccgtg
acgaggatggcgcacgcggccaggaagaacgtcgtttttgcgttttgcggagaagaagaa
gatgaaaaaggaggagataacaagaacaacaacaacgacggcgtgcttcgaattcagtat
ttcacgtgtgtcccagatatcgagctcagttctaacagaggtttttaa
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