KEGG   Bathycoccus prasinos: Bathy03g00550
Entry
Bathy03g00550     CDS       T03089                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
bpg  Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:bpg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bpg03041]
    Bathy03g00550
Spliceosome [BR:bpg03041]
 Complex B
  Other components
   Complex B specific factors
    Bathy03g00550
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st ANAPC4_WD40 WD40_CDC20-Fz EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WDR55 WDR90_beta-prop_4th Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_RIG_2nd LisH_TPL NBCH_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 19016593
NCBI-ProteinID: XP_007514136
UniProt: K8F220
LinkDB
Position
3:91626..93542
AA seq 638 aa
MESSEQEEEEQKELVRVDSEDVLKLVFQFLSEQNLYKTAKTLLQETDMDVDFVTEKSVSK
LTTSILAGEWEFVLDHFYNKNIISVSENVLEKILTQIALEMIEIRDVEVAKAILRETETM
KRCKDKSKMRRLEALAGMPKLPGEILMSLYVDEKDAGKLEKDDNAMKGASMEEIKEKVTK
MKLKRRKAIAEDVQSALRSVKPNVLMNLLGDAFKWRRHCGFVSESMLSSNDNSSFDVFLD
RSNLKDIFSHSSAGGKKRKNRDAEGGENNNNKYDYKNVNDDYVRAEKRSIGKFGKKSVVN
CLAISPDGLSVATGTADGFVELWKFSNGKLRTDLKYQNDDELLLHENGKVTALAFSPDFE
TLASADSTGVIKVWRIQTGRCVRTYPSAHHGAITKMEFSADGNGLLTSGFDGMARLHGLK
SGKTLKEYVNPTVSSGGITEQCECAIFCGTDKEFILAAYSNGLVLLFDAKTAEILKEHKH
PLLTKKSGDDKSSDDASKEAHVSEFVVKDMCRDPLSFDKVFLCGGAMKLVSFDAKTGKIE
RTFNAPTTSIPSEIIANTAYISVSVSRKGEYIYAANECNAIVRCWRVNDAKFVCETDARG
DVAEGDKDTSHCLACETHPQGNAIVTLSSPNICKLFTA
NT seq 1917 nt   +upstreamnt  +downstreamnt
atggaatcatcggaacaagaagaagaagaacaaaaagaactggtccgagtggactctgaa
gacgtgctgaaactggtcttccaatttctctcggagcaaaacttatataaaacggcgaaa
actttattgcaggaaaccgatatggacgtggactttgtgaccgagaaatcggtgtcgaaa
ttgacgacatcgattctcgccggcgagtgggaattcgttttggaccatttttataacaaa
aacataatatcggtttctgagaacgttttggagaagatattgacgcaaatcgcgttggaa
atgatcgaaataagggacgtggaagtcgcgaaagcgatattacgggaaacagaaaccatg
aaacgatgtaaagataagagtaaaatgagacggttggaagcgttggctgggatgccaaag
ttaccaggggagattttgatgtcgttatacgtggacgagaaagacgctgggaagttggag
aaagacgataacgccatgaaaggtgcttccatggaggagattaaagaaaaagtgacgaaa
atgaaactcaaacgtagaaaagctatagcggaagacgtgcaaagcgctttgcggtcggtg
aaaccaaacgtgttgatgaatttattaggggatgcgtttaaatggcgaagacactgcggg
tttgtctcggagagcatgttaagtagcaacgacaactctagttttgatgtgtttttagac
cgatcgaacttgaaggatatctttagccattcatccgcgggaggcaagaagcgtaaaaat
agagacgccgaaggaggcgagaataataacaacaaatacgattataaaaacgtcaacgac
gattacgttcgagccgagaaacgttcgattggtaaatttggtaagaagtcagtagtcaat
tgccttgcgatatctcccgatgggttatctgtggccacgggtaccgcggacgggttcgtc
gagctgtggaaattttccaacggaaaattacgaaccgatttgaagtaccaaaacgacgat
gaacttttattacacgaaaacggaaaggttaccgcgttagcgttctcgcccgattttgag
accttggcgtcggcggattcaaccggggtgattaaggtatggagaatacaaacggggagg
tgcgtgcgtacttacccatccgctcaccacggcgcaatcacaaagatggaattctccgcc
gacggcaacggattactcacctctgggttcgacggtatggctcgattgcacggtttgaaa
tctggcaagacgttgaaagaatacgtaaacccgacggtttcatctggtggtatcacggaa
cagtgcgagtgcgctatattttgtggcacggacaaagagttcatcttggcagcgtattcg
aacggcttggtcttgttgtttgacgcgaaaaccgcagagattctcaaagagcacaaacat
ccgctcctgacaaaaaagagcggcgacgataaaagcagtgacgatgcatcaaaagaagcg
cacgtctctgagttcgtcgtcaaagacatgtgccgagaccctttatcgtttgacaaggta
tttctttgcggaggcgccatgaagttggtttccttcgacgcgaaaacggggaagattgaa
cgcacgttcaacgcgccaaccacctctataccgtccgaaatcatagccaacaccgcgtat
atctccgtctccgtctctcgaaaaggtgaatacatctacgctgccaacgaatgcaacgcg
atagttcgatgctggagagtcaacgacgccaagtttgtttgcgaaaccgacgcgagaggc
gacgtcgcggaaggagacaaagatacttcacactgcctcgcctgcgagacgcacccgcaa
ggtaacgccatcgtcactctgtcgagtccaaacatttgtaaacttttcaccgcgtga

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