KEGG   Bathycoccus prasinos: Bathy03g00760
Entry
Bathy03g00760     CDS       T03089                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
bpg  Bathycoccus prasinos
Pathway
bpg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bpg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Bathy03g00760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpg03021]
    Bathy03g00760
   03019 Messenger RNA biogenesis [BR:bpg03019]
    Bathy03g00760
Transcription machinery [BR:bpg03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     Bathy03g00760
Messenger RNA biogenesis [BR:bpg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     Bathy03g00760
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_4 zf-CCCH_3 Nab2-like_zf-CCCH_ zf-CCCH_12
Other DBs
NCBI-GeneID: 19016614
NCBI-ProteinID: XP_007514445
UniProt: K8ECV8
LinkDB
Position
3:125804..126460
AA seq 218 aa
MADLEFDFEDNLEQTDLKTQTLAPTLAPSDQLEPRAQKNYRQTVCRHWLRNLCMKGDKCG
FLHQFDKERMPTCRYFAKYGECKEPDCPYKHSNDDVKECNMYKLGFCIHGPNCRYKHIRL
PGPAPPPNEACLIGRPGHIHGVLPFAARQRQKQIQEEKERQLLIASGEQPREEPAQAIAA
PLPPGPPPKKARTVDVNLALPEAQRVGAEPEQDFDFEA
NT seq 657 nt   +upstreamnt  +downstreamnt
atggcagatttagaattcgatttcgaggacaacctggagcagacggatttgaaaacgcaa
acgctcgcaccgacgttagcaccgtcggaccagctggaaccgagagcgcaaaagaattac
cgacaaacggtgtgcagacactggctgaggaatttatgcatgaaaggcgacaagtgtggg
tttttacaccagtttgataaagagcgaatgcctacgtgccggtactttgccaagtacggc
gagtgtaaagaaccggattgtccgtataaacactccaacgacgacgtgaaagagtgcaac
atgtataagcttgggttttgtattcacggaccgaactgtaggtataaacatattcggttg
cctggaccggcgccgccaccgaacgaagcgtgtttgattgggagaccgggacatattcac
ggcgtgttgccgttcgcggcgaggcaaagacagaaacaaatacaagaggagaaagagaga
cagttgttgattgcgagcggggagcagccgagggaggagccggcgcaagcgatcgcggcg
ccgttgccgcccgggcctccgccgaagaaggcgaggacggttgatgtaaacttagcgttg
cccgaggcgcaaagagtaggcgccgaaccggaacaagactttgatttcgaagcttga

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