Bathycoccus prasinos: Bathy03g02400
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Entry
Bathy03g02400 CDS
T03089
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03030
DNA replication
bpg03410
Base excision repair
bpg03420
Nucleotide excision repair
bpg03430
Mismatch repair
bpg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bathy03g02400
03410 Base excision repair
Bathy03g02400
03420 Nucleotide excision repair
Bathy03g02400
03430 Mismatch repair
Bathy03g02400
03440 Homologous recombination
Bathy03g02400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpg03032
]
Bathy03g02400
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy03g02400
Enzymes [BR:
bpg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bathy03g02400
DNA replication proteins [BR:
bpg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
Bathy03g02400
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
Bathy03g02400
MMR (mismatch excision repair)
DNA polymerase delta complex
Bathy03g02400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
REV3_N
POL3_N
DNA_pol_B_2
zf_Rg
Motif
Other DBs
NCBI-GeneID:
19016777
NCBI-ProteinID:
XP_007514118
UniProt:
K8ESZ8
LinkDB
All DBs
Position
3:join(450561..450840,450976..454040)
Genome browser
AA seq
1114 aa
AA seq
DB search
MNTTTTTNKREGDEKDFEEEEDKKRAKKDELEEDELETQETHPWSANEEILEEEVYVQDL
GKVSDDVKVVEAEKKSWNRKPLARPIDGQTDSILFQQLDIDYIIGQPHEMLGQERRSKGQ
AAILRMFGVTEDGHSVCVHVHGFNPYFYCAVPETFTEQHIPAFLMSLNSQMMAHQRSSNS
ARHFALDAHLILDKQSLMNFQPNGKKGRFLRIIMMLPTQVAQARGILENGIHVDELHQSA
LTFPTFESNILYTLRFMVDRAVVGGNWLELPAKNYRVRPQQRKASYCQIECDVMFDRFIS
HAAEGKYSKLAPFRILSVDIECAGRKGFFPDAEQDPVIQIATLVTEQGSDSPIIKAIWTL
DTCAPIVGAEVKSFRDERELLRDWGKFMRAVDPDMLIGYNIVNFDFPYLIKRAQTLGVQD
FPYWGRIIGKQLTIKDTTFSSKAYGTRESKEITIEGRVQFDMLQAIQRDYKLSSYSLNSV
SAHFLGEQKEDVHHSAISELQAGTAETRRRLAVYCLKDAYLPQRLLDKLMYTYNYIEMSR
VTGVPLSFLLARGQSIKVMSQLLRKARQRGLIIPARRDRGNGPNAQLEGEVAYEGATVLD
AKAGYYELPIATLDFASLYPSIMMAHNLCYCTLVKQHDVADLPPEAYTKAPTGDVFVKST
QFKGILPEILEELLSARKRAKQDLKKATDPLERAVLDGRQLALKISANSVYGFTGATVGQ
LPCLEISASTTAYGRQMIDHTKKLVEEKYTTANGYEGDAEVIYGDTDSVMIKFNCKELKT
SMEYGLEAADYVSATFTKPIKLEFEKCYWPYLLISKKRYAGLLWENSEKWTKMDTKGIET
VRRDNCLLVRQVVETCLTKILMDRDIPGAVKYVQNTISDLLMNKLDLSLLVITKGLTKTA
DEYAVKAAHAELAQRMFLRDPATAPVVGDRVAYVMIKATKNAKGYEKSECPIYAMDNNLP
IDHKHYLDNFLTKPLLRLFEPILQNAASVLLSGEHTRSIALPTPSSTLAGGIMRFAKVRP
SCVGCRAPITDEKLSKSLCKHCVEDESKHLQKALVTVNELEKDFNRLWTQCQRCQGSLHQ
DVLCTSRDCPIFYRRRKTQKDLIEATTTLKRFDW
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaccacaaccaccaacaagagagaaggcgacgaaaaggacttcgaggaggag
gaggacaaaaagcgcgcgaaaaaagacgagttagaagaggacgagttggagacgcaagaa
acacatccttggagtgccaacgaggaaatcttggaggaagaggtgtacgtccaagattta
ggcaaagtctccgacgacgtgaaagtcgtcgaggcggagaagaaaagttggaacaggaag
cctttggcgagaccgatcgatggtcaaacggattctatactttttcaacagttggacatc
gattacatcatcggccagccgcacgagatgctcggccaggagagacggtcgaagggccag
gcggcgattttgcgaatgtttggcgtgaccgaagacggccactcggtgtgcgtgcatgtg
cacggtttcaacccgtatttttactgcgcggtgccggaaactttcacggagcaacacatt
ccggcgtttttgatgtctttgaattcgcagatgatggcgcaccaaaggtcgtcgaattcg
gcgaggcatttcgcgctggacgcgcatttgattttagataaacaatcgctcatgaatttc
caaccgaacgggaagaaaggacgttttttacgcatcatcatgatgttgccgacgcaagtg
gcgcaagcgagagggattttagaaaatgggatacacgtggacgagttgcaccaaagcgcg
ttaacgtttccaacgtttgagagtaacattttgtacacgttaaggtttatggtagacaga
gcagttgtcggtgggaactggttggaattaccggcgaaaaattatcgcgtgcgtccgcaa
caaaggaaagcgagttattgtcaaatcgagtgcgacgttatgttcgatcgattcatctcg
cacgccgcggaaggaaaatattcaaagttggcgccgttcagaattttgtccgtcgatatc
gagtgcgctgggagaaaaggtttcttcccggacgccgaacaggatccggtgattcaaatc
gccacgctcgtcaccgaacaaggctcggattcgccgattattaaagcgatttggacgcta
gacacgtgcgcgccaatcgtcggcgcagaggtgaaatcgtttcgagacgagcgggagtta
ttgagagactggggtaagtttatgcgcgccgtcgatccagacatgctcattggctataac
attgtcaatttcgatttcccatatctcatcaaacgcgcgcaaacgctaggcgtgcaagat
tttccgtattgggggagaattatcgggaaacaactgacgattaaagacacgacgtttagt
tccaaagcgtacgggacgagagagtcgaaagaaattaccatcgaaggaagagttcaattt
gatatgctccaagcgattcaaagagattataaactttcgagttactctttgaactcggtg
tccgcgcacttcttaggcgagcagaaagaagacgtgcatcactcggcgatttccgagtta
caagccgggaccgcggaaaccagaagacgtttggcggtgtactgtttgaaggacgcgtat
ttgccgcaacgtctgttggataaactcatgtatacgtacaactacatcgaaatgtccaga
gttaccggcgtcccgttgtccttcttgttggcgagaggacaatcgattaaagtcatgtca
cagctgttgcgaaaagccagacaacgcggattgatcatcccagcgagaagagaccgcgga
aacggtccgaacgcgcaattagaaggtgaagtcgcgtacgaaggcgcgactgttttggac
gcgaaagctgggtattacgagcttccaatcgcgacgctcgatttcgcctctttgtaccct
tccatcatgatggcgcacaatttgtgctattgcacgttggtcaagcaacacgacgtggcg
gatttaccgccggaagcgtacacgaaagcgccaaccggagatgtttttgtcaaatccacg
cagttcaaaggtatccttccggaaattttagaggaactgttatcggcgcggaaacgagcg
aaacaggatttaaaaaaagcgacggatcctttagaacgggcggttttagacggtcgtcag
ttggcgttgaaaatatccgccaactccgtgtatggctttaccggcgccacggtcggtcag
cttccgtgtttggagatttccgcctcgacgacggcgtacggtcgtcagatgattgaccac
acgaagaaattggtcgaggaaaaatacaccaccgccaacgggtacgaaggcgacgccgaa
gtcatatacggcgataccgattccgtgatgattaaattcaactgtaaagaattaaaaacg
agcatggagtacggtttagaagccgccgattacgtctctgcgacgtttacgaaacccatc
aagttagaatttgaaaagtgttactggccgtatttgttaatctccaagaaaagatacgcc
ggtttactctgggaaaacagcgaaaagtggacaaaaatggataccaaaggcatcgaaact
gtgcgtcgcgataactgtctgttagtgcgccaggtcgtcgaaacgtgcttgacgaaaatc
ctcatggatagagacatccctggcgcggtcaaatacgtccaaaacaccatctcggattta
ctgatgaataagttggatttgtcgcttttggtcatcaccaaaggtttgacgaaaaccgcg
gacgaatacgcggtcaaagcggcgcacgcggagttggcacaacgcatgttccttcgcgac
ccagcgacggctccagttgttggcgaccgcgtcgcatacgtcatgattaaagccacgaaa
aacgccaaagggtacgagaaatccgagtgcccgatttacgccatggataacaacttaccc
atcgatcacaagcactacttggacaacttcttgaccaaacctttgttgcgtttgttcgaa
ccgatactacagaacgccgcatctgttctcctctctggtgaacacaccaggtcgatcgcg
ttacctaccccgtcttccaccttggccggcggcatcatgcgcttcgcgaaagtccgcccg
tcctgcgtcggttgccgcgcaccaatcacggacgaaaagctctccaaatctttgtgtaaa
cactgcgtggaagacgaatctaaacatctccaaaaagcgttagtcacggtgaacgaactc
gagaaagacttcaaccgtttatggacgcaatgtcaaagatgtcaaggttcgttgcaccaa
gacgtcttgtgcacgtcgagagactgtccgattttttaccgaagaaggaaaacgcagaaa
gatttgatcgaagccacgaccacgttgaaacggttcgattggtag
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