Bathycoccus prasinos: Bathy03g02710
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Entry
Bathy03g02710 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
bpg
Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy03g02710
03036 Chromosome and associated proteins [BR:
bpg03036
]
Bathy03g02710
Enzymes [BR:
bpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bathy03g02710
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
Pre-60S particles
Helicases
Bathy03g02710
Chromosome and associated proteins [BR:
bpg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
Bathy03g02710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
Cas3-like_C_2
ResIII
ERCC3_RAD25_C
CMS1
DUF5956
Ku_C
Motif
Other DBs
NCBI-GeneID:
19016808
NCBI-ProteinID:
XP_007514064
UniProt:
K8EC49
LinkDB
All DBs
Position
3:complement(517997..520804)
Genome browser
AA seq
935 aa
AA seq
DB search
MQSAVGLLLSSAPSPALTLTSPTKASSSSFETKKMTTRAFLSSAARRLRKRRTIISLSTR
GGAPSAAGAITSSPCSYSYAHVRMRKDATTTTTTTKRCFGTTSFSSSSTRSKAILSSTDD
DVVPENIDLQLPADMPEFDDDYEEIVAKVDKLFVKSSSSSSASLSGAEVENDDEEDADDA
DEEEDFVVDSDDEEDEEDEDVLVAEIDEKTIKVSVDADPTSINNFNLHPITIAALKKKGI
ETLFPIQVAALEPAQSGRDVVARAKTGTGKTLAFSLPIVEKFLREDEEENNRGDEDGEGT
RRRGSRDKRPRCIVLAPTRELAQQVEREIYSLAPSFETLTVYGGAPIGPQESKLRRGVDF
VVGTPGRVMDLLNRGTLDLSRVQHVVLDEADQMLAVGFEEDVETILEDVPKNRQTFLFSA
TMPHWVKKLQQKFLVDQVNIDLVGEDTGKINKDIDLMSCSVAFPSKCAVLMDLVTVHAKG
NKTIVFTQTKRDADEVTASLGKRVSTEVLHGDIAQAQRERTLQRFRQDKFSVLVATDVAA
RGLDVDNVDLVVHYELPNETESFVHRCGRTGRAGKKGTAIALHTDREFYRLRDIKRFTGA
DIREINPPSSSEVMAASAATAEHRIHAVDEDVLEFFLPAAKDMIRNVQQKTTNDDEETET
ETEDETLTSQEEIERRAQELLARALAALSGHTEAPPPKSLLTGSPGQVTMIVEDVNGDLP
AFSARDLLATLGDKDRRLSSGVGKITFFARNSGKNGAAFDVSYEFAQELLDMGTIAGFEV
TKATVLPELARDSGGRAGAFGGGGRGGGRGGRGRDGFSRGGGRGGGRFSRDGGGRGGFSR
DRGGGGRFSGGGFSRGGDRGGGGGYSSRDGGGFERRDGGGFERRDRGGGGGFERRDRGGG
GGGGGYSSRSGNSREGGYSSAGSRSGGGGGDWSMQ
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcgcagttggactcctcctctcgtctgctccatctcccgcactcactttaacg
tcaccgacgaaagcatcgtcgtcatcttttgagacgaagaagatgacgacgcgcgctttt
ctttcctccgccgcgcgacgtttaagaaaaagaagaacgattatttctttgtccactcgt
gggggtgcgccgtcagccgccggggcgataacctcctccccgtgttcgtattcttacgcg
cacgtgaggatgagaaaagatgcgacgacgacgacgacgacaacgaaacgatgctttggc
acgacgagcttttcctcctcctcgacgagaagtaaagcgatcttgtccagcacggacgac
gacgtcgtgccggagaacatcgatttgcaattaccggcggatatgcccgagttcgacgac
gattacgaagagattgtggcaaaagtggataaattgttcgtcaagtcgtcctcgtcgtct
tcggcttctttatccggtgctgaagtcgaaaacgacgacgaagaggacgcagacgatgca
gacgaggaggaagacttcgtcgttgactccgacgacgaggaggatgaagaggatgaagac
gtcttggtggcagaaatcgacgagaaaacgattaaagtctccgtggacgccgacccgacg
tccatcaacaacttcaacttacacccgatcacaatcgccgctttgaagaagaaagggatt
gaaacgttgtttccgattcaagtggccgcgttggaaccggcgcagagtgggagagatgtc
gtggcgcgagcaaagactgggacggggaagacgctggcgttttctttgccaatcgtggag
aagtttttgagagaagacgaggaagaaaataatcgaggcgatgaggacggggaaggaacg
aggaggagagggtcgagagataaaagaccgcggtgtatcgtgctcgcgccgacgagagaa
ttggcgcagcaagtcgagagagagatttattcgttggcgccgtcgtttgagacgttgacc
gtgtacggaggcgcgccgattgggccgcaagagtccaagttacgccgaggcgtcgatttc
gtcgtcggtacgccggggagagtgatggatttgttgaatcgaggtacgctcgatctttct
cgagtgcaacacgtcgttttagatgaagcagatcaaatgctcgcggttggattcgaggaa
gacgtggagacgattttggaagacgtgccgaagaacaggcaaacgtttttgttcagcgcg
actatgccgcactgggtgaagaagttgcaacagaaattcttggtggaccaggtgaatatt
gatttagtcggagaagataccgggaagattaacaaggatattgatttgatgtcctgttcg
gttgcgtttccatcgaaatgtgctgtgttgatggatttggttacggtgcacgcaaaaggc
aacaaaaccatcgtgtttacgcaaacgaagcgagacgcggacgaagtcaccgcgtcgtta
gggaagagagtctcgacggaggttttacacggcgatatcgcccaagcgcaacgtgagaga
actttgcaacgttttcgccaggataagttttcggttctagtcgccacggatgttgcggcg
agaggtttggacgtcgataacgtcgatttagtcgtgcactacgaacttccgaacgaaact
gaatcgttcgtacacagatgcgggcgtaccgggagagccggaaagaaagggaccgcgatt
gcgttgcacacggacagagagttttacagattgcgtgacataaaacggtttaccggtgcg
gacattcgagaaattaatcctccgagttcctcggaagtcatggctgcttcggctgccacc
gcggaacaccgaattcacgcggtcgacgaagatgtcctggaatttttcttacccgcggca
aaagatatgattagaaacgtacaacaaaagactactaacgacgatgaagaaactgaaacc
gaaactgaagatgaaacactgacgtcccaggaagagattgaacgcagagcccaagagctt
cttgcgagagctttagccgcgctcagtggtcacaccgaggcgcctccgccaaaatcgttg
ctcactggctccccaggtcaagtgacaatgattgttgaagatgtcaacggtgacttgccc
gcgttttctgcgcgtgatttactcgccacccttggcgacaaagaccgccgactctcctca
ggtgtcggtaaaatcacattcttcgcccgaaactctgggaaaaatggcgccgctttcgac
gtctcttacgagttcgcgcaagagctattggatatgggtactatcgctggctttgaagtc
acgaaagcgaccgtcttaccggagctcgcgagagactctggaggccgagcaggcgcgttt
ggcggtggcgggagaggcggaggccgaggcggaagaggccgagacggtttttcaagaggt
ggaggtcgaggcggaggccgattctcccgagatggcggtggtcggggcggtttctccaga
gatcgcggcggaggcggacgcttctctggcggtggcttttcgagaggcggcgatcgaggc
ggcggcggcggatattcctcccgagacggcggaggcttcgaacgcagagatggtggtggt
tttgaacgcagagaccgcggcggcggtggtggttttgaacgcagagaccgtggcggcggc
ggcggtggcggtggatattcctcccgaagcggaaacagtagagaaggtggttattcctcc
gccggctctcgatccggcggcggtggcggcgactggtccatgcaataa
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