Bathycoccus prasinos: Bathy03g02900
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Entry
Bathy03g02900 CDS
T03089
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Bathy03g02900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpg03019
]
Bathy03g02900
03012 Translation factors [BR:
bpg03012
]
Bathy03g02900
Messenger RNA biogenesis [BR:
bpg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Bathy03g02900
Translation factors [BR:
bpg03012
]
Eukaryotic type
Release factors
Bathy03g02900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
TSLPR_D1
Motif
Other DBs
NCBI-GeneID:
19016827
NCBI-ProteinID:
XP_007514059
UniProt:
K8EC45
LinkDB
All DBs
Position
3:join(556487..556558,556832..558103)
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AA seq
447 aa
AA seq
DB search
MASMGDDQEENIEMWKIKKVSHIYLIKGLTEARGNGTSMISLVIPPKGQVNLVNKMLTDE
IGTASNIKSRVNRLSVLNAIGSAQTRLKLYNRVPDNGLIIYTGTVLTDEGKEKKMNIDFE
PFKPINTTLYMCDNKFHTECLHDLLAADQTYGFIIMDGNGTLYGTLCGNHREVLQKITVD
LPKKHGRGGQSALRFARLRLEKRQNYLTKVAELATHHFITNDKCNVAGLILAGSADFKNR
LSEADVFDARLSAKVLNVIDVSYGGDNGFSQAIELSADTLANVKFIAEKKLIGKFFDQIA
QDTGKFCFGINDTLNCLDMGAVETLVVWEDLPHERLELINSVTGTTEVKILTPEQQKDPK
HFHDAENNQLETTEKIAFSEWLAKEYKKFGCQLEFISDKSQEGNQFCQGFGGCGGLLRYQ
VDLDAFEVPDDVDSDSGFGSDSSEAFI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatgggcgacgaccaggaggagaacatcgagatgtggaagattaagaaggta
tcacatatatatttaatcaaaggcttgaccgaagcccggggaaacgggacgtcgatgatt
tctctcgtcattccaccgaaagggcaggtgaacttggtgaataagatgctcacggacgaa
atcgggaccgcgtcgaacattaaatcgcgggtgaatcgcttgtccgtgttaaacgcgatc
gggtccgcgcaaacgaggttgaagctttacaatcgcgtgcccgataacgggttgatcata
tacaccgggacggtgttaaccgacgagggaaaggagaaaaaaatgaacattgattttgaa
ccgtttaaaccgattaacacgacgttgtacatgtgcgataacaagtttcacacggagtgt
ttgcacgatttattggccgcagatcaaacgtacgggtttattatcatggacggtaacggg
acgctgtacgggacattgtgcgggaaccatcgggaagtgttgcagaaaattaccgtagat
ttgccgaaaaaacacgggagagggggtcagtccgcattgcgtttcgcgcgtttgcgttta
gaaaaaaggcagaactatttgacgaaagttgccgagttggcgacgcaccattttatcacc
aacgataagtgtaacgtcgccggattgattttagccggttccgcggattttaaaaacaga
ctgagcgaggcggatgtttttgacgctcgattgagcgcgaaggtgttgaacgtcatcgat
gtctcctacggtggcgataatggattttctcaagccatcgagctctccgcggacacgctg
gcgaacgtaaaattcatcgccgaaaagaaactcatcggtaaatttttcgatcaaatagcg
caagataccggcaagttttgtttcggcatcaacgatactttgaattgtttggatatgggc
gcggtcgaaaccttagtcgtttgggaagacttaccgcacgaacgcttagaactcatcaac
tccgtcactggaaccaccgaggtgaaaattctcacccctgaacagcaaaaagacccgaaa
cactttcacgacgccgaaaataaccaactggaaacgacggaaaaaatagccttcagcgaa
tggttggccaaagagtacaaaaaattcgggtgccagttagaattcatctcggacaaatcg
caagaaggaaaccagttttgccaaggtttcggcggctgcggaggtttgctgagataccaa
gtcgatttggacgcgttcgaggtccccgacgacgtcgactcggactccggattcggaagc
gactcgagcgaggcgtttatttaa
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