Bathycoccus prasinos: Bathy03g02980
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Entry
Bathy03g02980 CDS
T03089
Name
(RefSeq) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bpg
Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy03g02980
Enzymes [BR:
bpg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Bathy03g02980
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Bathy03g02980
Prokaryotic type
Bathy03g02980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Suppressor_P21
Motif
Other DBs
NCBI-GeneID:
19016835
NCBI-ProteinID:
XP_007514254
UniProt:
K8ECJ1
LinkDB
All DBs
Position
3:574768..576507
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AA seq
579 aa
AA seq
DB search
MSSEEERVILTPELKARIERNKREALERLKANEKKLSQRARVHGDRIRRVNGEDAKNNVA
NGQYVLYWMQSSQRARYNEALEVAVERANAHKKPVVVAFALTCDYEDANERHYNFMVKGL
LDVKEGLSRRNVPFFLVTKKKKRKEEKEDASGIPEAILSLSKNAIEIITDCGYLRVLRIW
RETLARKVSIPITEVETDVVVPVFAHLSSRPKLDVSAASFRAFALPKSFEHTENVPDLEE
IVPLWNAEDVKKARMSVMDVLDDRFAFVIDGRIASSSSSSTPSTSAKQTADDILSVLKTE
FGLKETPHIPKCDKYHIGGEIEAMLKLDAFLDSVVLRKYGELRNDCSLGLQSHLAPYIHY
GQISVLHVAKRARRFANAHKTDEKIQKSVEVFLDELIIRRELGIQFVVKKRETYDTFDAL
PIWCINTLEKHKDERETRYTYEELEKGQTDDPLWNAAQNELRISGKTHNYTRMYWGKKVV
EWFRDSREAWTVLMRLNDTYSLDGRDPNSYTGVGWVFGLNDRSFPEAPIMGEVRRMSMSG
CKKKFGKAIDAYIDRWNGQREKGGRQVSIANMFKKQKTR
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgaggaagaacgcgtcatcttaacgcctgaactgaaagcgaggatcgagagg
aacaagagagaggctttggaaagactgaaggcgaacgagaagaagctttctcaacgagcg
cgcgtgcacggcgataggattcggagagtaaacggtgaagacgccaaaaataacgtggcg
aatggacaatacgttttgtattggatgcaatcgtcgcaacgcgcgcgatataacgaggcg
ttggaggtggcggtggagagagcgaacgcgcataagaagccagtcgtcgttgcgtttgcg
ttgacgtgcgactacgaggacgccaacgagaggcattataatttcatggtgaaagggttg
ttggatgtcaaagaaggtttgtcgaggcggaacgttccgtttttcttggtgacaaagaag
aagaagcggaaggaggaaaaagaggacgcgtccggcattccagaggcaattttatcccta
tccaagaacgcgattgagatcatcacggactgcggatatttgcgagtgttgagaatttgg
cgcgaaacgctcgcgcgtaaagtttcgataccaataacggaagttgagacggacgtggtt
gttccagtgttcgcgcacttatcttcgcgaccaaagctagacgtttctgccgcatcgttt
cgcgcgttcgcgttgccgaaatcgttcgagcacacggaaaatgtgccagatttggaagaa
attgtgcctttatggaacgccgaagatgtgaaaaaagctcgcatgtcggtgatggatgtg
ctcgacgacagatttgcgttcgtcatagacggtagaatcgcatcttcttcgtcgtcgtcg
acgccttcaacatccgcgaaacaaaccgccgatgatatcttgtccgttttaaaaacggaa
tttgggttgaaagaaacgccacatattccaaaatgtgacaaatatcacatcggaggcgaa
atcgaagcgatgcttaaactcgacgcgtttctcgattcagtcgtattgcgcaaatacggt
gaacttcgtaacgactgttcgctcggactccaatcgcatttggcgccctacatacactat
ggtcaaatctccgttttacacgtcgccaaacgcgcgcgaaggtttgcgaatgcacacaaa
accgatgaaaagattcaaaaaagcgtcgaagtctttctggacgaactcatcattcgaaga
gagttggggattcaattcgtagtaaaaaaaagagaaacctacgatacgttcgacgctttg
cctatttggtgcattaatacgctcgagaagcacaaagacgaaagggagacgagatatacg
tacgaagagctcgaaaaaggacaaacggacgatcctttatggaatgccgcgcaaaatgaa
ttgcgcatctcgggtaagacgcacaactacacgcgaatgtattggggtaaaaaagtcgtc
gaatggtttcgcgattcgagagaggcgtggactgtcttgatgcgattgaatgatacgtat
tctctcgacggtcgcgacccgaattcctacacgggcgtaggttgggtgtttggactcaac
gataggtcgtttccagaagctccgattatgggtgaggttcgacgaatgtccatgagcggg
tgtaaaaagaaatttggcaaagccatagacgcgtacatcgatcgatggaacggtcaacga
gagaaaggtggtcgccaggtttccatcgcgaacatgttcaagaaacagaagacacgatga
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