Bathycoccus prasinos: Bathy03g03490
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Entry
Bathy03g03490 CDS
T03089
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Bathy03g03490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpg03041
]
Bathy03g03490
Spliceosome [BR:
bpg03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
Bathy03g03490
Complex B
Bathy03g03490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
U1snRNP70_N
zf-CCHC
zf-CCHC_2
DUF4901
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
19016886
NCBI-ProteinID:
XP_007514355
UniProt:
K8ECN0
LinkDB
All DBs
Position
3:complement(663835..665766)
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AA seq
643 aa
AA seq
DB search
MSSGGNGSSLPPFVNAQPHNPLLMKQPGIPPLGMMMPPPGGMMMPSQGGGGGPPGMMFPP
NPMLMMPPGGAGAGGAPMMMPLMGGGNPSSNLLMRPINLNQHPTGLPPNLLVMFKARPPV
KWFPPAKARKTCKRLTGIGKYLYLFGEKENEEGEEKRESMILGEEKDTDEDASDVDVNDD
GEIIEIDEETKRKRKEEKEKFALLPAKTKKKLEKGKKMLKEALKAWDPHKDEKATGDPYA
TLFVARLPYAACEDEDVLRREFERYGDIKAIRIVRDTDTGKPTGYAFIEFETEDDMKRAF
ARADGTRIEGKRVIVDAERGRTTPNWRPMRLGGGLGGYTKQLSKKEIRMKAMGNQSRRGG
GGGGGGGGGFRGGPGGPGGGGGGGGGRGGRAGFGDDRTCHVCGQTGHFARECPDRREMNR
GRGRFGGGGGGGRGGDDMRDRGDLPPPPSRGDRGGIGFSGGRDDTRERSPGAAPAPRFGT
GMIMDDDRDRGGDRFGGGGGGRDGRDDRRPPRYGDDFDRDRRGGGRDRKRGRSRSRSRSR
SRSPPARRRSRYDDDYDRERGPDRRRSDRRDDDDTHRGGRDTRGRGDRRGGGGYGRSRSP
SPNYRDFVDEPPPPPASRGGRRSHRRSPSPPPAKKESSEEGEL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgggggcaatggatcttctttaccgccgttcgtgaatgcgcaaccacacaat
cctttactgatgaaacaaccgggaataccgcctctgggaatgatgatgcccccacccggt
ggaatgatgatgccttcacaaggaggaggaggaggaccaccggggatgatgttcccgccg
aatccgatgctcatgatgcctcccggaggagcaggagcaggaggggctccgatgatgatg
ccactcatggggggaggaaatccgtcgtcgaatttactgatgcgaccgattaatttgaat
caacacccgacgggtttgccgccgaatttgttggtcatgttcaaagcgaggccgccggtg
aagtggtttccgccggcgaaagcgaggaagacgtgtaaacgtttgacgggaatcgggaag
tatttgtatttattcggcgagaaggagaacgaggaaggagaagagaagagagagtcgatg
attttaggagaagagaaggacacagacgaggatgcctccgacgtggacgtgaacgacgac
ggagagatcatcgagatcgacgaggagacgaaacggaagcgaaaagaggagaaggaaaaa
ttcgcgctgttgccggcaaagacgaaaaagaaattagaaaaagggaagaagatgttaaaa
gaggctttgaaagcgtgggatccgcataaagacgagaaagcgactggagacccgtacgcg
acgttgtttgtcgcgagattaccgtacgcagcgtgcgaagacgaggacgtgttacgacga
gaatttgaacggtacggcgatattaaagcgatacgaatagtcagagatacggataccggg
aaaccaacggggtacgcgtttatcgagtttgaaacggaagatgacatgaaacgagcgttc
gcgcgcgcagatgggacgagaattgaaggtaaacgggtcatcgtagacgcggagagagga
cgaacgacgccgaattggcgaccgatgcgcttaggcggcggtttaggaggatacaccaaa
cagttgagcaagaaggaaattcgaatgaaagcgatggggaaccaatcccgaagaggaggt
ggaggaggtggaggtggaggtggcggtttccgaggcgggcctggtggccccggaggaggt
ggtggcggtggcggcggtagaggcggtagagctgggtttggtgacgatcgtacctgtcac
gtgtgcggccaaaccggtcatttcgcgcgagagtgcccggacagaagagagatgaaccga
ggcagaggaagattcggtggtggtggtggtggtggtcgtggtggcgacgatatgagagac
agaggagaccttcctcctcctccgtcgagaggagatcgaggcggtattgggttttccggc
ggccgagacgatactcgcgaacgaagtcccggagcggcgccggcgccgaggtttggcacc
ggcatgattatggacgacgatcgcgacagaggaggagatagattcggcggcggtggtggt
ggtcgagacggccgggacgacagacgtccaccgcgttacggcgacgacttcgaccgagac
cgcagaggcggcggcagagaccgcaaacgcggaaggtcccgctcccgctctcgatctcga
tctcgcagcccgcccgcgcgaagaagaagcagatacgacgacgattacgaccgcgaaaga
ggcccagaccgccgccgatccgatcgccgagacgacgacgacactcatcgcggcggccga
gacacccgaggccggggagaccgccgcggcggcggcggctacggtcgctcgcgctcgccc
tcgccgaactaccgagactttgtcgacgaaccaccgccacctccggcgtctcgcggagga
cgacgaagccatcgccgctcgccctcgccacctccggccaaaaaagaaagctcggaagaa
ggcgaactttag
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