Bathycoccus prasinos: Bathy04g00610
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Entry
Bathy04g00610 CDS
T03089
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bathy04g00610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpg03032
]
Bathy04g00610
Enzymes [BR:
bpg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bathy04g00610
DNA replication proteins [BR:
bpg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
Bathy04g00610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
19016087
NCBI-ProteinID:
XP_007513730
UniProt:
K8EUU9
LinkDB
All DBs
Position
4:complement(join(85184..90046,90352..90501))
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AA seq
1670 aa
AA seq
DB search
MSSRPSRRNASKTDQAKQKLEQLKQLKETKGKKRLDDIDGDEDVANVYDEYSFCFYETLT
FFVSAVVVVTIIIIFIYQVTEEEYAKLVAKRRKENANFVVGAEENDEYVDMGEEEDWTRE
NPAYRDDEGDDEDGRNNANASMDAEDEDGGAANGNTKSKKELAKEKKRKQLEKEKLKASK
GVGLAGLKMDMKKRKAELEQKEAEAADADALLEDILAGVDQADDDMLGDAGVKPALKKSK
KKKAKKAKIAVEEMDAKAKKKAAFAKKKGVAFPDEPPLNDEDDDAVKPMDDHDDDMGAPA
AVADDDDDVVVDGTVAPPDVNMDDDNDDKEVEDVDVKKMTTAKQALPTENKGAGAAIAYG
DYDSEDDEEDAELALREKLAAEWKPDSGLPVDDFDKTLPFYFLDAQEDIGSPGTVFLFGK
VPTRRDPQTNVLDPSLGTVSSCAVVNNMQRCVFVVPRLEFTPQSLDESNELKTLEEKANA
KDASKADKVALLKWLQVKTKPVKDELKKIMSERGVDQYTMKPVYRKYCFERNDIPSGGQY
VIKLKYSYLNSALPSDIKGETFCGALGTQTNALEHLLVKSKIMGPSWLALHNAEIVPQAT
LKDKEAMKSWCKLEVNLQNGHKSVRNPTVEAIEALGLGGQQRDPPTVIVAALKLQTVVNH
KTNANEICSASVVYLQDVRVDVGTDCRAKVTDMPCEWEKKARHFSLVRKLSGGNWPSGWE
QHVANENKTNNVAKRTKSIVLSAQADERGLLSILLARLSQIDADVICGHNVAGFDVDVLL
NRLRENKVAHWSRIGRLKRTRFPNLSGGNQGSFGGGASIGALSCMSGRLLADTYLSARDL
LKEVSYTLTNLMKTQFDENRAEIPHQDVPLQFNSTQTLWQLTKNSQTDAFYSLWLMLHLQ
ALPLTRQLSNIAGNTWSKTLGHTRAQRVEFLFLHEFHKRKYMVPDRLSAKEKRRVQAAEA
KNGNGDKDVDDKKGPQYSGGLVLEPKKGLYDKYVLMLDFNSLYPSIIQEYDICFTTVKRG
KDMAGLAPELPPPVLGKPGGENAAVLPQVICKLVQHRRAVKELLKKETNDVIKAQLDIRQ
LALKLTANSMYGCLGFSASRFYAKPLAELITGQGREILQSTVDLAQNLSYDVIYGDTDSI
MINTNKDNLAEVHKVGQEVKREVNKRYKLLEIEMDGCYRSMLLLKKKKYAAVVVEPSMHE
GKTIYVERVEKKGLDTVRRDWCKLAKDVGDTCLDEIFKKRAVEDTVEKIHDALREARTKM
VNNQVNLESYIVTKQLTKSPRDYPDANSQPHVKVALRRIEQGKQDGVNAGETVPYIICCE
VKPEDEKDMTNDAIANGHASSKSGGKGLAERAFHPEELQENPNLRVDLHYYLTQQLHPVI
SRLCAPIEGTDAARLADCLGLDASKFAARNVGADDDDMNANRYAACSLDDDAMYEKCEPL
KLFASDGKTEFTFPGVRDILLGKISCADALKPPSARGVVSATEDKENATTTSVKTPQPKT
PGSGTAATTPDAATTQKSKTDASATTTIQPLSAAAFTNQVTLQVRKTIQKYYAQKLRSDD
ELYPCETRDITLKAVGDVEVGTKPLNTICSGVMKKSFEERELYTQLVHFKRLLSRKDALG
RIKDQSIRGTCEKNITKEMRTALDLAKDEVEEVLNLSAYRWVNLSTLFGF
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcgtccgtcgcgtcgaaacgcgtccaaaaccgatcaggcgaaacaaaagttg
gaacagctgaaacagctgaaagaaacgaaagggaagaagcggttggacgacatcgacggc
gacgaagacgtcgcgaacgtgtacgatgagtattctttttgcttctacgaaacgctcacc
ttttttgtctcggccgtcgtcgtggtcacgatcatcatcatatttatttatcaggtcacg
gaggaagagtacgcgaaactcgtcgcgaagcgacggaaggaaaacgcaaactttgtggtc
ggcgcggaagagaacgacgagtacgtcgatatgggggaggaggaagattggacgcgagag
aatccggcgtacagagacgacgagggcgacgacgaggacggtaggaataatgccaatgct
agcatggacgcggaagacgaggatggaggagcagcgaatgggaatacaaagtcaaagaag
gagctcgcgaaggagaagaagcgcaaacagttggagaaggaaaagttgaaagcgagcaaa
ggcgttggtttagccgggttaaaaatggatatgaagaagcgaaaagcagagttggagcag
aaggaagcggaagcggcagacgcagatgcacttttggaggatattttagccggcgttgat
caagccgacgatgacatgttgggagacgccggagtgaagccggcgttaaagaaatccaaa
aagaagaaagcgaaaaaagccaagattgcggtcgaagagatggacgcgaaagcaaagaaa
aaagcggcgtttgcaaagaagaagggcgtcgcgtttccggacgaaccacctttgaatgac
gaggatgatgatgccgtgaagccgatggatgatcacgacgatgatatgggtgctcccgct
gcggttgcggacgacgacgacgacgtcgtcgtcgacgggacggtcgcgccgccagatgtt
aacatggacgacgataatgacgacaaagaggttgaagacgttgatgtgaagaaaatgacg
acggcgaagcaggcgcttccaacggaaaataaaggcgctggtgccgcgattgcttacgga
gattacgactccgaagatgatgaagaagacgccgagctagccttgcgcgaaaagctcgcc
gctgaatggaaacccgattctgggcttcccgtggacgattttgataaaacgttgccgttt
tactttttggacgcgcaagaagatattggttccccaggtaccgtcttcttgtttggtaaa
gtgccaacgcgcagagacccgcaaacgaacgtcttggatccttctttgggcaccgtctcg
tcttgcgccgtcgttaataacatgcaaagatgcgtctttgtcgtccctagacttgagttt
acgccgcaatcgttggacgaaagcaacgagctcaagacgctggaggagaaagcgaacgcg
aaagatgcgtccaaagccgacaaagtcgctctcttgaaatggttgcaagtgaaaacgaaa
ccagtcaaggacgaattgaagaaaatcatgagcgaaagaggcgtcgatcagtacacgatg
aaaccagtctatcgtaagtattgcttcgaaagaaacgatattccaagcggcggtcagtat
gtgatcaagctgaagtattcgtacttgaactccgcgttaccgtcggatatcaaaggcgag
actttctgcggcgccttgggcacgcaaacgaacgcgttggaacacctgcttgtgaaatcg
aaaatcatgggtccctcttggttggctttacacaacgccgagattgttccgcaagcaact
ttgaaggacaaagaagccatgaagtcatggtgtaagcttgaagttaatttgcagaacgga
cataagtctgtccgaaacccgacggtggaggctatcgaggcgctcggcctcggcggccag
cagcgcgatccgccgacggtgattgtcgccgcgttgaaattgcaaacggtcgtcaatcat
aaaacgaacgcaaacgagatttgctccgcgtccgtcgtgtatttgcaagacgtgcgagtg
gatgtcggtacggattgccgcgcgaaagtgacagatatgccgtgcgaatgggaaaagaaa
gcgagacacttttcgctggtgcgcaaactctctggcggtaactggccgtcgggctgggag
caacacgttgcgaacgaaaacaagacgaacaatgtcgccaaacgtacaaagtcgatcgtc
ctttccgcgcaagcagacgagcgagggttgttgtccattctgctggctcgactatcgcaa
atcgatgctgatgttatttgcggacacaacgtcgccggtttcgatgtggacgtgttgttg
aacaggttgagagaaaacaaagtcgcgcactggtccagaatcggtcgattaaaacgcacg
agatttccaaatttatccggtgggaaccaaggctcttttggcggtggcgcgagcattggt
gcgctctcgtgcatgtccggacgcttgttagcggacacgtacctctcggcacgcgatttg
ttgaaggaagtttcatacactttgaccaatttgatgaaaacgcaattcgacgaaaataga
gctgaaattccgcatcaagacgttccattacagttcaactctacgcaaacgttgtggcag
ttgaccaagaactcgcaaacggatgcgttttattcgttatggttgatgttgcacttgcaa
gcgctgccgttgacgagacagttgtcgaacattgccggaaacacgtggtcgaagacgtta
ggacacacgcgcgcccaacgcgtcgagttcttgtttttgcatgagttccacaagcgtaaa
tacatggttccggatcgtttgtcggccaaggaaaagagacgcgttcaagctgccgaggcg
aagaatggcaatggcgataaagatgtggacgataaaaaaggtccgcaatactctggtggt
ttagttcttgaaccgaagaaaggtttgtacgataagtacgtcttgatgttggatttcaac
tcgttgtatccgtctatcatccaagagtacgatatttgttttacgactgtcaagagaggt
aaagacatggccggtttagccccagagcttcctccgccggttctcggaaaaccgggcgga
gaaaacgccgccgttcttccgcaagtcatttgcaagttggttcaacacagaagagcggta
aaagaactcttgaaaaaagaaacgaatgatgtcataaaagcgcaattagatattcggcag
ctggctttgaaacttaccgcgaacagtatgtacggttgtttgggtttcagcgcgtctcgc
ttttacgccaaaccgctcgccgagttgatcaccggtcaaggtcgtgaaattttacaatcc
accgtagatttggcgcaaaacttatcctacgatgtcatctatggcgatactgattctatc
atgatcaacacgaacaaagataacttggcagaagtgcacaaagttgggcaagaggtcaaa
cgagaagttaacaaacgctacaaacttctcgagattgaaatggatggatgttatcgctcg
atgcttttgttgaagaagaaaaaatacgccgcagttgtcgttgaaccatccatgcacgag
ggcaaaacgatatacgtggagcgcgttgagaagaaaggcttagataccgttcgtagagat
tggtgtaagctcgcgaaagatgtcggggatacgtgcttagatgaaatttttaagaaacgc
gcggttgaagacacggtagagaaaatccacgacgcgttgagagaggcgagaacgaaaatg
gtgaacaaccaagtcaacttagaatcttacatcgtgacgaaacaattgacaaaatcaccg
agagattacccggacgcgaattcgcagccgcacgttaaggttgccttgcgtcgcatcgag
caaggtaaacaagacggcgtcaacgcgggcgagaccgtgccgtacatcatctgttgcgag
gtgaaaccagaagacgagaaggacatgacgaacgacgccattgctaatggacacgcgtcg
tcaaagtctggaggcaaaggattagccgagcgcgcgtttcatccggaagaattgcaagag
aatccaaacttgagagtcgatttgcactactacttgacgcaacagttgcacccggttatt
tctcgtttgtgcgctccaatcgaaggtacggatgccgcgcgattggcggattgtttaggc
ttggacgcttccaaatttgccgcgagaaatgtcggagccgacgatgacgacatgaacgcg
aaccgatacgcggcgtgctcgttagatgacgacgcgatgtatgaaaagtgcgaaccgttg
aagttgtttgcgagcgacggcaagacggagtttacgtttccgggcgtccgagacattctt
ctcggtaaaatttcctgcgctgacgcgttgaaaccgccgagtgctagaggtgtcgtcagt
gccactgaggataaagaaaatgccaccaccacttctgtgaaaacaccgcaaccgaaaacg
ccgggatctggaacggccgcgacgacgccggatgccgcgacgacgcaaaagagtaaaacg
gacgcttcggcaacaacaacaattcaaccgctttccgccgctgcttttacgaatcaagtc
accttacaagtacgcaaaacgatccaaaagtattacgcacaaaagttgcgttccgacgat
gaattgtacccgtgcgaaaccagagacatcacgttgaaagcggtgggagacgtcgaagtc
ggcacgaaaccgttgaataccatttgctctggcgtcatgaaaaaatcgttcgaagagaga
gagttgtacacgcagctcgtccatttcaaacgtttgttgagcagaaaagacgcgttgggt
agaattaaagaccaaagtattcgtggcacttgcgaaaagaacatcacgaaggaaatgaga
acggctttggatttggcgaaggacgaagtcgaggaagtgttgaatttgagcgcgtacaga
tgggtcaacttgagcactctgttcggcttctaa
DBGET
integrated database retrieval system
