Bathycoccus prasinos: Bathy04g01000
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Entry
Bathy04g01000 CDS
T03089
Name
(RefSeq) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bpg
Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpg03016
]
Bathy04g01000
Enzymes [BR:
bpg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Bathy04g01000
Transfer RNA biogenesis [BR:
bpg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Bathy04g01000
Prokaryotic type
Bathy04g01000
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
19016125
NCBI-ProteinID:
XP_007513588
UniProt:
K8F3I9
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All DBs
Position
4:172408..173433
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AA seq
341 aa
AA seq
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MTATKLLALRRATTSCYATSSSVIFYRRKCDDGVLTRKRFVCASSSSSNESSSSSEEAPS
ANGGDRAYTPKKVWGPPLEVSKTLNRRPTVLEWRGPNFPQDQSDGLVFLVDKPQEWTSFD
VCAKIKSMSKKMGVKKIGHCGTLDPMATGLLIVVIGRATKLADEYQAKVKTYTGTIKLGE
KTASGDADNEVIETKPFGEDIVNEASMEAARASLIGDIEQIPPMFSAVHVDGKRLYESAR
EGKTVERKPRPVHVGAFSIKRRETENETHLIDFEVTCSKGTYVRTLAEDFCEKMGTVGHL
VKLRREKIGDFDVKDAFELPALLDEISITVSEHQNQKNSYQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgacgaagctcttggcgctgagacgagcgacgacgagttgttacgcgacatca
tcgtccgttatcttttatcgcaggaaatgcgatgacggcgtgctgacgcgaaagagattt
gtatgcgcgtcttcgagcagctcaaatgagtcttcttcctcctcggaagaagcgccaagc
gcgaacggcggggacagagcgtacacgccaaagaaagtatggggacctcctttggaggta
tcgaaaacgctcaaccgaaggccgacggttctcgaatggcgagggccgaattttccgcaa
gatcaaagcgatggattagttttcttggtggataaaccgcaagagtggacttcgttcgac
gtgtgcgcgaaaatcaaatctatgagtaagaaaatgggggtgaagaagattggacactgc
ggtacattggatccgatggcgactgggttgttgattgttgtcatcggtagagcaacaaag
ttggcggatgagtaccaagcgaaggtgaagacgtatactgggacgattaagttaggcgag
aagacggcatcgggtgatgcggataacgaagtcatagaaacgaaaccgtttggcgaggac
attgtgaacgaggcgtcgatggaggctgcaagggcgagtttgatcggcgacatcgagcag
attccaccgatgttctctgccgtgcacgttgatggtaaacgactctacgaatccgcgaga
gaaggcaaaacggtggaaaggaaaccgcgaccggttcacgtgggagcgttttctataaaa
agacgagagactgaaaacgaaacgcatttgatcgatttcgaagtcacgtgttcaaaaggc
acgtacgttcgaacgttagcggaagacttttgcgaaaaaatgggtaccgttggtcattta
gttaaactgcgcagagagaaaataggcgattttgacgtgaaggatgcgttcgaacttccc
gccttgctcgatgagatatcaatcacagtttcggaacaccaaaatcaaaaaaatagctac
cagtag
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