Bathycoccus prasinos: Bathy04g03550
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Entry
Bathy04g03550 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Bathy04g03550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy04g03550
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Bathy04g03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D3
Nrap_D5
Nrap
Nrap_D4
Nrap_D2
Nrap_D6
PAP_central
DUF2194
Motif
Other DBs
NCBI-GeneID:
19016381
NCBI-ProteinID:
XP_007513832
UniProt:
K8EE49
LinkDB
All DBs
Position
4:687672..690995
Genome browser
AA seq
1107 aa
AA seq
DB search
MSAKTITFKPPSSVKAVGGHSYGGALSFNTNNRGGKDGKEEDTTPAIDVAIEMPSSCFNE
KDYLDHRYHLKRMVYLKHIQKQLLMSRKKKNIAKKFVKKCDLTFYQNDNRKPCLTITIDN
HERDLKVRVLPCCAANLFPKQRLGPTKSNLKKNEVRFESPRYSQSIAEDAAMHSINEWLQ
NKYKEVKFLGAASVLIKAWASRRHLFEYSNDGITGFFLSCLLAHMVETSDALSPAMDTNQ
LVQGFFVTLATAKKNSSGIANSKRTNGSNKSSGELESSSIPNYFTGGVFCDSELDEETKK
SWIGAFKVVFLSPCGSLNLASRISQGAIEELVQEAVKSSEVLEQAGRNAFVEVFLTDLPR
AVRYDLHMQVEISPTSSLKDVKDISSETRIAEEEIFSIMKIAMNDRADAVRCASIGTSAC
NANKIWIGVQLNPENGLKVIDVGPPTDNEAEAKTFRAFWGEKSELRRFKDARICEAVVWS
FVPASRRHHIPAVAAEYALKKNVKGIDSITWTSKVFDDLLSSSDGSFVAVSEHSKHLLQT
LDRLARRMKEMKDVPLKVYNVQPISAAFRGCDPFPPKQHPLMFGIGAGLGKDDEVISACP
RTLNVLVQLEGSGRWPEEEEEIIKTKQLMAIEIAEKLKQSFGTPNIVSNDGTVDILHEGY
AFRLFLNASNGGPLIREIEAEQAIVSKHAMLLASISSRFPTFAIAVQIAKRWIASHMFSP
HVPDEIIELLVAKVFCHPGGLSPPNSREVAFARFLELLCTHPFGILPLVLDPESSGGQTG
EDCAVSRDAIKRAEDLLLPSAMKDDVEEEEEKDSDDDDDNNKENGTKERIIEKKKFKGPP
SMVILSPYDLTGTFWTRDRNLDGENVPSVVTMKRLQSIAAKALKTLQTYLENGGNMLTAN
NNAGEEEEEVMWEKLFRPNLGAFDGVLLFRKSVLPFPDEALFTQAKMRKVLKRAFKTNLS
TAADDEEEEDEEEEEDFILHEKKKKRRKELSLTKLPKRLMQLGPEKAREALLVGFDPIKA
FLDDSEKRCGNTALFFHDKYGGSFVAVAVKPETLRIHRDVVKLLENDSFVFASSSSSQRV
PTKDAILEELATIPGDGIVDGLMKDRR
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaaaacgattacattcaaacctccgagctcagttaaagcagttggaggccat
tcgtacggaggggcgttaagctttaacacgaataataggggaggcaaggacggtaaggag
gaggacacgacacctgcgattgacgtagctatcgaaatgccgtcttcgtgcttcaacgag
aaggactacttggatcatcggtaccatttgaaacgaatggtgtatttgaagcacatacag
aaacagttattaatgagtaggaagaagaaaaacatagcaaagaaattcgtcaagaagtgc
gatctgactttttatcaaaacgacaaccgaaagccgtgcttgacgataaccatcgataat
cacgaaagagatttaaaagttcgagtgttgccgtgttgcgctgcgaacttgttcccaaaa
caaagactcggtccaacgaaatcaaatttgaagaaaaatgaagtccgtttcgagtcgcct
cggtattcacaatccatcgcggaggatgcggctatgcatagcatcaacgagtggctgcaa
aataaatacaaagaggtgaaatttctaggggccgcttcggttttaatcaaagcgtgggcg
tctagacgtcatctgtttgaatactccaacgatggtatcactggctttttcctttcgtgc
cttttagcgcacatggttgaaacaagtgatgcgctttcgccggcaatggacacgaatcag
ctcgtccaaggcttttttgttacgctcgcgacggcaaagaaaaacagcagtggtatagca
aatagtaagagaacaaatggtagcaacaaaagtagtggcgaattagaaagtagcagcata
ccgaattatttcaccggcggtgtattttgtgattcagaactagatgaggagacgaaaaag
agttggatcggagcctttaaagttgtcttcttgagtccatgcggatccctgaatttagcc
tcgcgaatatctcaaggtgcgattgaagagttggttcaagaagcggtaaaatcgagcgaa
gttttagaacaagccggaagaaatgcatttgtggaagtatttctaaccgatttaccgaga
gctgtacggtacgaccttcacatgcaagtcgaaatatcgccgacatcgtctctgaaagat
gttaaagatatttcctccgagactcgcatcgcggaagaggagatcttctcgattatgaaa
atcgctatgaacgatcgcgcggacgcagtgaggtgcgcgagtattggaacatcagcgtgc
aacgcaaacaaaatatggattggggtccaattaaatcccgaaaatggtttgaaagtaatc
gatgttggaccaccaacagataacgaggctgaagcaaagacgtttcgagctttttggggg
gaaaaatcggagcttcgccgtttcaaagacgcgagaatttgtgaagcagttgtgtggagc
tttgtgcccgcatcaagaaggcaccacattccagccgttgcagcagaatatgcgctgaag
aagaacgtcaaaggtatcgattcaatcacgtggacatcaaaagtatttgacgatttgtta
tcttcctcggatggctccttcgtggctgtctcggagcactcgaaacatcttttgcaaaca
ttagaccggttggcaagacgcatgaaagagatgaaagacgtcccgctaaaagtgtataat
gttcaaccaatttctgcggcatttcgtggatgcgatccgtttccacccaagcaacatcca
ttaatgtttggcatcggtgctggtctaggaaaagacgatgaagtcatatcggcttgtcca
cgaacgttgaacgttttagtgcaattagaaggttcgggtcgttggcccgaagaggaagaa
gaaatcataaaaacaaagcagctaatggcaattgaaatcgcagagaaattgaaacaatcg
ttcggaactccgaacattgtctcgaacgatggaactgtcgatatattacacgaaggttac
gcgtttcgattatttttgaacgcctcaaacggcggtcctttaattcgagaaattgaggct
gagcaagcaattgtgtcgaaacacgcgatgttgcttgcatcaatttcctcgagatttccg
acgtttgcaattgcagtacaaattgccaagcggtggatagcttctcacatgttctctccg
catgttccggatgaaattatcgagttgttggttgcgaaagtcttttgtcacccgggagga
ttgagtccaccgaattcgagagaagtcgcttttgcacgattcttagagcttctttgtacg
catccttttggcatactgcctctcgtgctcgatcccgaaagttcaggaggacaaaccggc
gaagactgcgccgtttcaagagatgctatcaaaagagcggaagatttactcctgccgtcg
gctatgaaggatgatgttgaagaagaggaggagaaggacagcgatgatgatgatgataat
aataaggagaacggtacaaaagaaaggataatcgagaagaaaaagttcaagggaccgcct
tcgatggttattctttcgccttacgatctgaccggcacgttctggacgcgcgacagaaat
ttagatggcgagaacgttccatccgtagtcactatgaaaagattacaaagtatcgctgca
aaggcgctcaaaactttgcaaacatatttagaaaacggaggaaatatgttaaccgcaaac
aacaatgcgggagaagaagaagaggaagtcatgtgggaaaaactattccggccgaacctg
ggtgcatttgacggcgtacttctctttcgtaaatcggtcttgccgtttccagatgaagcg
ttgttcacgcaagcaaagatgagaaaagttttgaaacgcgcattcaaaacaaatctatcc
accgccgcagatgatgaagaagaagaggacgaagaagaggaagaagatttcatccttcac
gaaaagaaaaagaagcgtcggaaagagttatcgctgacgaaacttccaaagcgtcttatg
caactcggtccggaaaaggctcgcgaagcgttgttggttggttttgatccaatcaaagcg
tttttggacgattcggagaaacggtgcggcaacaccgcgctattcttccacgataagtac
ggcggttctttcgttgcggttgcggtaaaaccagaaacactgcgcatccatcgggacgtg
gtgaagttgcttgaaaacgacagcttcgtgtttgcttcttcttcttcttcgcaacgagtg
ccgacgaaagatgccatcttagaagagttggcgacgattcctggtgatggcatcgtagat
ggattgatgaaagatagaagatag
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