Bathycoccus prasinos: Bathy05g04250
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Entry
Bathy05g04250 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
bpg
Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy05g04250
Enzymes [BR:
bpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bathy05g04250
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
Pre-60S particles
Helicases
Bathy05g04250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
19015928
NCBI-ProteinID:
XP_007513006
UniProt:
K8EF09
LinkDB
All DBs
Position
5:complement(820577..823309)
Genome browser
AA seq
910 aa
AA seq
DB search
MGLNKRGRKEDEGESSSSNYSSSDDDENADENKNKTTTNVEEFGFERVEKLTGRRLKQEK
LNKKKQKSGGFESMDLPPDIFRAIKRKGYRLPTPIQRKAIPVISTGVDVVAMARTGSGKT
AAFVVPVLAALQKHSLRNGARALILAPTRELALQTFAVTRDMAKFTDLRLCALVGGDSME
MQFEDLANNPDVIVATPGRVLHHTNEIESFSLRLVEKVVLDEADRLLEMGFQEQLSEIMK
KVSQSRQTLLFSATLPSALAEFVKVGLREPRVIRLDSEMKISEDLRLTFALVRKEEKIAA
LLRILQTVVENEKSQTVVFASTRHHVEHLETLLKKEGHSCVSIFGAMDFAARKIALATFK
SGKANVMVVTDVAARGIDVPLLDNVINYDFPANAKLFVHRVGRVARAGRKGIAHSILVKE
ELGYVVDLHLFLGRKIKPADIVPPQNEEEAEKRAREGDANEESVVGTFPIGSLDLLADRV
RELHETHIELEALQKTTVNAYKAYQKTRIPASSESVARAKPLIECGPHPLFCAAIFRKAS
NAGGTANTTTYKNAKELAELMRGMKNYRPHATVLEAEFASAGKIGKNWKSSVSVNAMSEK
RKAHAKFIEMRNNGEEKTKKLRPLGDDENPIVAGNTHADDDADDDDDDGSDDDSDNDEGN
DDDEDDERVNGVDIGAGGGGGSGGKKKLKTLVSQDAFSRGKFRDDEFFMDVVPRKINHKE
LGLSTKEGCTMDDLDEMTMDIVAEDGASMRKQKKLVSVWDKKKKNYVQVDANEIGKNGKR
IKNESGKVVSKDTLGKTYKKWQSKTNRYVSQVGEVEDEKTRARYDKKKRAGASEGGGMSR
FKRHFHTKGTDGGGNGSGNNAPSELRNADQIRKGRKEDIRKKKSGRGGGRSGGRGGGRSG
GRGGRGKGRK
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaacaagagagggagaaaagaagacgaaggggaatcgtcgagcagtaattat
tcgtcgtctgatgatgatgagaatgctgatgagaataagaataagacgacgacgaatgtt
gaagaattcggattcgaacgcgtggaaaagctcaccggccgaagattgaaacaagagaaa
ctgaacaagaaaaagcagaaatccggcgggtttgaaagcatggatttgcctccggacatc
tttcgagcgattaagcgcaaaggctatcgattgccgacacctattcagaggaaagcgatt
ccggtgataagcaccggcgtggacgtggtggcgatggcgaggaccgggagcgggaagacg
gcggcgtttgtggtaccagttttagcggcgttgcagaagcactcgctgaggaacggcgcg
agagcgttgattctcgcgccgacgagggagttggcgttgcaaaccttcgcggtgacgaga
gatatggcaaagtttaccgatttacggttgtgcgctttagtcggcggcgatagcatggag
atgcagtttgaggatttggcgaataatccggacgtgattgtggctacgccggggagagtg
ttgcaccacacgaacgagattgaaagtttcagcttacgattggtggaaaaagttgtttta
gatgaagccgatcggttgttagagatgggttttcaggagcaactttcggagattatgaaa
aaagtgagtcaatcgagacagacgttgttgttttccgcgacgttgccgagcgcgctggcg
gagtttgtgaaagtcgggttgagagaaccgcgagttatacgtctcgattcggagatgaaa
atatctgaagatttgcgattgacgttcgcgctcgtgcgcaaagaggagaaaatagcagcc
ttattgagaatcttacaaacggtcgttgaaaacgaaaaatctcaaacagtggtctttgcg
agcactcgacatcacgtggagcacttggaaacgctgctgaaaaaagagggccactcgtgc
gtgtccatattcggggcgatggatttcgcggcgagaaaaatcgctctggcgacgttcaaa
tcgggtaaggcgaacgtgatggtcgtcaccgacgtcgcggcgagaggtatcgacgtgcct
ttgttagataacgtgattaattacgattttccagcgaacgcgaaattgttcgtacacaga
gtcggtcgcgttgccagagctgggaggaaaggtatcgcgcactcgatattggtaaaagaa
gagttagggtacgtcgtcgatttacacttgttcttgggtagaaaaatcaaaccggcggat
attgtgccaccacaaaacgaagaagaagcggaaaaacgagcgagagaaggcgacgcaaac
gaagagtctgtcgtggggacgttcccaatcggttccttagatttactcgccgaccgcgtc
cgggaattgcacgaaacgcacatcgagctggaagcgttgcagaaaaccaccgtgaacgcg
tacaaagcgtaccaaaagacgagaattccagcaagttcggaatccgttgctcgcgcgaaa
ccactcattgaatgtgggccacacccgttgttctgcgccgccatctttcgaaaagcgtcc
aacgccggaggaacggcgaacacgaccacatacaaaaacgctaaagagttggccgaactc
atgcgcgggatgaaaaattaccgcccgcacgcgaccgtcttagaagccgagtttgcttcc
gctgggaaaatcggaaagaactggaaaagttcggtatcggtgaacgcgatgagtgagaaa
cgaaaagcgcacgcaaagtttatcgagatgcggaataacggggaagaaaagacgaagaaa
ttgagacctttaggggatgatgagaacccgattgtcgccggaaatactcacgcggatgat
gacgctgatgatgatgatgatgatggcagcgatgacgattcggataacgacgaaggcaac
gacgacgacgaagacgacgaacgagtaaacggtgtcgacattggagcaggaggaggagga
ggttctggaggtaagaagaagctgaaaacgctagtctctcaagacgccttctcacgaggt
aaatttcgcgacgacgagttcttcatggacgtcgttcctcgcaaaatcaatcacaaagag
cttggattgagcacgaaagaaggttgcacgatggacgatttagatgaaatgaccatggac
attgtcgccgaagacggcgcgtccatgcgcaaacaaaagaaacttgtcagcgtttgggac
aagaagaagaaaaattacgtccaagtcgacgcgaatgaaatcggcaagaacggaaagagg
attaaaaacgaaagcgggaaagtagtttcgaaagatacgctcggaaagacgtataagaag
tggcaatcgaaaacgaacagatacgtttcgcaagttggtgaggttgaagacgagaaaacg
cgcgcgagatacgataagaagaagagagccggtgcgtccgaaggcggcggcatgagccgg
ttcaagcgacattttcacacgaaaggtacggatggtggcggaaatggttcaggaaacaac
gcgccgagcgagctcagaaacgcggaccagattcgaaaaggaagaaaagaagacatccgg
aagaaaaagagcggtcgaggtggaggaagatcgggaggaagaggtggaggaagatcagga
ggaagaggtggacgcggcaaaggacgtaaatag
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