Bathycoccus prasinos: Bathy06g01720
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Entry
Bathy06g01720 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Bathy06g01720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy06g01720
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Bathy06g01720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Utp21
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
NBCH_WD40
DNA_primase_lrg
BBS2_Mid
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
19015152
NCBI-ProteinID:
XP_007512367
UniProt:
K8EFR9
LinkDB
All DBs
Position
6:complement(307076..310927)
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AA seq
1283 aa
AA seq
DB search
MALFAPFRVLGDVSSDVPFSTHKRGIETYATTASGRTFHIFDCKKLTLAMLGSMHEADVS
LVCAKRDWTFTACSGRKIYCSRRVNVTCELVGHATEVKHLFAFGTLLVSIDRSEHVLVWD
ISEKVMKRREREYRAFTRESERKAREERRRQVLERRKEKEERRRTNSKESSTTTTRVAST
KEIFNELMRKAPWCLRKIKRLEKAKDIGSFPGDDDDDDGDEEGKGNNMQRKRSHRDEEDS
DEDEDDTFKRVRDMDKLDPDAITGRRYEGEDSDSDEDEGEENDSDDDEEEEDEEDELEDD
KGEGEKKDGKDDDANAEEEGEDPMDLAATIMVLPDSFGGSITCIAHPDTYINKVVLGNKR
GKLLLLNIVTGRIVKVLGGTADDLETNDAEITFVQNSPALDVIAVGFSDGRCVLYDINKE
RAIMTLPHDCKVTCCAFNAQGNQDDNDPLIVVCDVNGTITTWDLEKRRQRDLNQRAHDSE
IISCYFFPGQPLLMTSAKDNSLKQWAYDQSDGSSRLLKFRCGHGKPPNLVSFYADGKRIF
ASGSDKSLRVWSTIQDQQSKELSQSRVASRAKKLNIHEEELKLPTVSYVSWNELREYSWA
NIASCHEKENKVYTWRLGTGILGENVLETPQKEGDTSECTSCAISQCGSYCFVSYESGAV
RRYNMQSGLHRGDLKRVVGVGPDNRIDKNALAKSLKGNEGYNFPGGKKSVWAYSGPQLGS
IIDSRYTTSAHDGKCALVQTDGMNRYVCTTGGEDAKVRVWKYSDMKLEGEMDLGAPALHG
TGYLHKTAELFAVALQDGTIRLFDIGTKKRVRTFRLNKEKSNQDGGDEKDVDGSKKKKKK
KKLVLATKVEITSDREWVISCDTLGMLKVFDIPSARLLQTMKMGSDRITSFALSPTLEYL
ATTHAGKRGVFLWNNRSLLSTDEGLDDVVESIGGTVELEAPKMTALADDDGNSSLEKGSD
VNDQMLLDDDADDEDDMILDAADEMEAKKTDPWEQQKRDLIASIPAQLGPGMATLSLLPQ
KQLEDLNNLDEIRARKGKDPNVRNMTDAEKEEEQDDFGQVRAPFFLPTKADDTDVRNSAF
IVEENGDDDDDDMKKGDNAQVAVRSRILKRNDENGNSLDADCELLRRWKRGAREIAEFEQ
LRLANSARKNKPIALKQKARTSAYDGPYREALRLLLASTPEIVESEIKSIGPWDIETATE
EELEQIGIGIDFFHHEVLSGMNYDAIQALLRLFLASHGETIASNEGLKDRCRKLRQAVSE
SWERLDGMFNEIRATFSHYAGAH
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtttgccccgtttcgagtcctcggggatgtctcctcggacgttccattctcg
acgcacaaacgaggcatcgaaacgtacgcgacgactgcctccgggcgaaccttccacatc
ttcgactgtaaaaagctcacgttagccatgctcggttcgatgcacgaagcggacgtttca
ctggtgtgcgcgaaacgagattggacgtttaccgcgtgctccgggaggaagatttattgc
agccgccgggtgaacgtgacgtgcgaactcgtcggacacgcgacggaagtgaagcatttg
ttcgcgttcggaactttactcgtgagcatcgatcgatcggagcacgttttagtgtgggac
ataagcgagaaggtgatgaaaaggagagaacgagagtatcgcgcgtttacgagggaaagc
gagaggaaagcgagggaggagagaagacggcaagtgttggaaaggaggaaagagaaggag
gaacgaagacgaacgaatagtaaggagagtagtactactacgactcgcgtggcgtcgacg
aaagagatttttaacgagctgatgaggaaagcgccgtggtgtttgcggaagattaaacgt
ttggagaaggcgaaggatattggttcgtttcccggagacgacgacgacgacgacggcgac
gaggaaggaaaagggaacaatatgcaaagaaaacgatcgcacagagatgaagaagattcc
gacgaggacgaggacgatacgtttaaacgcgtcagagatatggataagttggacccagat
gcgattaccggacgacggtacgaaggcgaagactcggattccgatgaagacgaaggagaa
gaaaatgactcggacgacgacgaagaggaggaggatgaggaagacgaattggaagacgac
aagggagagggagagaagaaagatggtaaagatgacgatgcaaacgcagaagaggaggga
gaagacccgatggatttagcggcgactattatggtcttacctgattcgttcggtgggagc
ataacctgtattgcgcatccggatacctacattaacaaagtcgtcctaggaaataaaaga
gggaaactattactattgaatattgtcaccggacgcatcgtaaaagtgttaggtggcact
gcggacgatttagaaacgaacgatgcggagattacgtttgttcaaaactcgccggcactc
gatgtcattgcggttggtttttcagacggacggtgcgttttatacgacatcaataaagag
cgagcgattatgacgttaccacacgattgtaaagtgacttgctgcgcgtttaacgcgcaa
ggaaatcaggacgataacgacccactcattgtcgtgtgtgatgtgaatggcacgataacc
acgtgggacttagagaagcgacgacagagagatttgaaccagcgagcgcacgacagcgag
attatttcgtgttattttttcccgggacaaccgttactgatgacctcggcgaaagataac
tccttgaagcagtgggcgtacgatcagtcggatggttcgagcagattgttaaagtttcgc
tgcggccacgggaaacctccaaatttagtatcattctacgcggacggaaagcgcatcttt
gccagcggtagcgacaaatctttgagagtgtggtcgacgatccaagatcagcagagcaaa
gaactttcgcaatcgcgcgtcgcatctcgagccaagaaactgaacatacacgaagaagag
ttgaaactaccgacggtgtcgtacgtgtcgtggaacgaattgcgcgaatattcgtgggca
aatatcgcatcctgccacgaaaaggaaaataaagtgtacacgtggcgattgggaaccgga
attttaggtgaaaacgtgctggagacgccacaaaaagaaggcgatacttccgagtgcact
tcgtgcgctatatcgcaatgcggcagttactgcttcgtgagttacgaatccggcgctgtt
cgcaggtacaatatgcagagcggtcttcatcgcggcgacttgaagcgcgtcgttggcgtc
ggcccggataacaggatcgataaaaacgccctggcgaaaagcttgaaaggtaacgaaggg
tacaactttccaggcggtaaaaaatccgtgtgggcgtattctggtccgcaattgggtagc
atcatagacagtaggtacacgacgtcagcgcacgacggaaaatgcgccttggtgcaaacg
gacggcatgaaccgttacgtgtgtaccaccggcggagaagatgcaaaggttcgcgtgtgg
aaatatagcgacatgaaacttgaaggcgagatggatttaggcgcacctgcgttacacgga
acaggctatttacacaaaactgcggaattattcgccgttgctttacaagatggaactatt
cgattgttcgatattggaaccaagaaacgagtgcggacgtttcgcttgaacaaggagaaa
agcaaccaagacggcggcgatgaaaaagacgttgacggaagtaaaaagaaaaagaaaaag
aaaaagctggtcttggcgacgaaagtggaaatcacctccgatcgcgaatgggtgatttcc
tgcgacactctcggcatgcttaaagtcttcgacattccctctgctcgtttattacaaaca
atgaaaatgggatccgatagaatcacaagttttgcgctgtcgcctacgctcgagtatctc
gcgactacgcacgccggtaaaaggggcgttttcctctggaacaatcgatcgcttctctcc
acagacgaaggcttggacgatgtcgttgaaagtatcggtggtacagttgagcttgaagca
ccgaaaatgactgcattagcagacgacgacggtaactcatcgttagagaaaggatccgac
gtaaacgaccagatgcttttagacgacgacgcggacgatgaagacgacatgatactcgac
gccgcggatgagatggaagcgaaaaaaaccgatccgtgggagcaacaaaagagagatttg
attgcgtctatccctgcgcagctcggccctggcatggcaaccttgtctttgcttccgcaa
aagcagttggaagatttgaacaacctggacgaaattcgcgccagaaaaggaaaggatcca
aacgtgcgaaacatgacggatgcagagaaagaggaggagcaagacgattttggacaagtg
agagcaccattctttctacctacgaaagcagatgataccgatgttcggaactctgcgttc
atagtcgaagaaaacggcgatgatgacgatgatgatatgaaaaagggcgataacgctcaa
gtcgccgtgcgttccagaatcttaaaacgcaacgacgagaacggaaactctttagatgcc
gattgcgaacttctcagacgatggaagcgaggtgcgcgcgaaattgccgaattcgaacaa
ctccgcctcgccaatagcgcgaggaaaaacaaaccaatcgcgctgaaacagaaagcccga
acgtccgcgtacgacggcccgtaccgcgaagccctccgtctcctcctcgcctccactcca
gaaatcgtcgaatctgaaatcaaatccatcggcccttgggacatcgaaaccgccacggag
gaggagttagaacaaatcggcatcggcatagatttctttcaccacgaagttctctccgga
atgaactacgacgccatccaagccttactgcgcttgtttctcgcctcgcacggcgaaacc
attgcctcgaacgaaggcttaaaagatcgatgcagaaagttacgccaagccgtctcggag
agctgggaacgcttggacggcatgtttaacgaaattcgagcgacgttctcgcattacgcc
ggcgcgcattga
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